Pages that link to "Institute of Systems Biology"
The following pages link to Institute of Systems Biology:
View (previous 500 | next 500) (20 | 50 | 100 | 250 | 500)- Copy folder (analysis) (← links)
- Export element (analysis) (← links)
- Analysis of Cis-Regulatory Modules (analysis) (← links)
- Annotate track with genes (analysis) (← links)
- Bowtie (analysis) (← links)
- ChIP-seq peak profile (analysis) (← links)
- Change profile cutoffs (analysis) (← links)
- Chromosome enrichment (analysis) (← links)
- Compare site models (analysis) (← links)
- Construct IPS CisModule (analysis) (← links)
- Convert site models to proteins (analysis) (← links)
- Convert table to track (analysis) (← links)
- Create IPS model (analysis) (← links)
- Create Match model (analysis) (← links)
- Create profile from gene table (analysis) (← links)
- Create weight matrix model (analysis) (← links)
- Filter one track by another (analysis) (← links)
- Filter track by condition (analysis) (← links)
- Gene overlap statistics (analysis) (← links)
- Gene set to track (analysis) (← links)
- Genome coverage (analysis) (← links)
- Heterozygous site caller (analysis) (← links)
- IPS motif discovery (analysis) (← links)
- Join tracks (analysis) (← links)
- Merge track statistics (analysis) (← links)
- Motif quality analysis (← links)
- Mutation effect (analysis) (← links)
- Preprocess raw reads (analysis) (← links)
- Process track with sites (analysis) (← links)
- Read counter (analysis) (← links)
- SNP matching (analysis) (← links)
- Site counts in repeats (analysis) (← links)
- Site distribution (analysis) (← links)
- Site search on gene set (analysis) (← links)
- Site search on track (analysis) (← links)
- Site search result optimization (analysis) (← links)
- Site search summary (analysis) (← links)
- Track coverage (analysis) (← links)
- Track statistics (analysis) (← links)
- Track to gene set (analysis) (← links)
- Creasemarks analysis (← links)
- Mass Conservation Analysis (← links)
- Metabolic Control Analysis (← links)
- Reactions Analysis (← links)
- Sensitivity Analysis (← links)
- Steady State (analysis) (← links)
- Stoichiometric Matrix (analysis) (← links)
- Create DAS track (analysis) (← links)
- Agilent normalization (analysis) (← links)
- Annotate table (analysis) (← links)
- Apply state to diagram (analysis) (← links)
- CRC Analysis (← links)
- Cluster analysis by K-means (analysis) (← links)
- Convert table (analysis) (← links)
- Convert table via homology (analysis) (← links)
- Create folder (analysis) (← links)
- Enrichment analysis (← links)
- Filter table (analysis) (← links)
- Functional classification (analysis) (← links)
- Illumina normalization (analysis) (← links)
- Join several tables (analysis) (← links)
- Join table (analysis) (← links)
- PASS analysis (← links)
- Select table columns (analysis) (← links)
- Venn diagrams (analysis) (← links)
- Compare Experiments (analysis) (← links)
- Gene features (analysis) (← links)
- Validate Experiments (analysis) (← links)
- Linear Shifted Model (analysis) (← links)
- Nonlinear Model (analysis) (← links)
- SDE model (analysis) (← links)
- Upload from FTP (analysis) (← links)
- Extend network (analysis) (← links)
- Join diagrams (analysis) (← links)
- Cellular genetic algorithm (analysis) (← links)
- Evolution strategy (SRES) (analysis) (← links)
- GLBSOLVE (analysis) (← links)
- Particle swarm optimization (analysis) (← links)
- Quadratic Hill-climbing (analysis) (← links)
- Simulation analysis (← links)
- Correlation Analysis (← links)
- Fold-Change calculation (analysis) (← links)
- Hypergeometric analysis (← links)
- Meta analysis (← links)
- Polynomial Regression analysis (← links)
- Up and Down Identification (analysis) (← links)
- Run MACS 1.3.7 on ChiP-Seq (analysis) (← links)
- Run MACS 1.4.0 on ChiP-Seq (analysis) (← links)
- MicroRNA aligner (analysis) (← links)
- Building Flux Balance DataTable (analysis) (← links)
- Flux Balance Constraint (analysis) (← links)
- Tagir Valeev (← links)
- Category:ISB analyses (← links)
- Stanislav Loskutnikov (← links)
- Ivan Yevshin (← links)
- Fedor Kolpakov (← links)
- Ilya Kiselev (← links)
- GC island finder (analysis) (← links)
- Biouml.plugins.agentmodeling (plugin) (← links)
- Biouml.plugins.bionetgen (plugin) (← links)
- Biouml.plugins.biopax (plugin) (← links)
- Biouml.plugins.bowtie (plugin) (← links)
- Biouml.plugins.cellml (plugin) (← links)
- Biouml.plugins.chemoinformatics (plugin) (← links)
- Biouml.plugins.chebi (plugin) (← links)
- Biouml.plugins.creasemarks (plugin) (← links)
- Biouml.plugins.das (plugin) (← links)
- Biouml.plugins.enrichment (plugin) (← links)
- Biouml.plugins.ensembl (plugin) (← links)
- Biouml.plugins.fbc (plugin) (← links)
- Biouml.plugins.expression (plugin) (← links)
- Biouml.plugins.genemodels (plugin) (← links)
- Biouml.plugins.genenet (plugin) (← links)
- Biouml.plugins.geneways (plugin) (← links)
- Biouml.plugins.ginsim (plugin) (← links)
- Biouml.plugins.gne (plugin) (← links)
- Biouml.plugins.go (plugin) (← links)
- Biouml.plugins.graphml (plugin) (← links)
- Biouml.plugins.gtrd (plugin) (← links)
- Biouml.plugins.gxl (plugin) (← links)
- Biouml.plugins.hemodynamics (plugin) (← links)
- Biouml.plugins.illumina (plugin) (← links)
- Biouml.plugins.kegg (plugin) (← links)
- Biouml.plugins.matlab (plugin) (← links)
- Biouml.plugins.lucene (plugin) (← links)
- Biouml.plugins.microarray (plugin) (← links)
- Biouml.plugins.miriam (plugin) (← links)
- Biouml.plugins.modelreduction (plugin) (← links)
- Biouml.plugins.obo (plugin) (← links)
- Biouml.plugins.optimization (plugin) (← links)
- Biouml.plugins.pass (plugin) (← links)
- Biouml.plugins.psimi (plugin) (← links)
- Biouml.plugins.proteinmodel (plugin) (← links)
- Biouml.plugins.reactome.biohub (plugin) (← links)
- Biouml.plugins.reactome (plugin) (← links)
- Biouml.plugins.research (plugin) (← links)
- Biouml.plugins.sabiork (plugin) (← links)
- Biouml.plugins.sbgn (plugin) (← links)
- Biouml.plugins.sbml (plugin) (← links)
- Biouml.plugins.sbw (plugin) (← links)
- Biouml.plugins.sedml (plugin) (← links)
- Biouml.plugins.server (plugin) (← links)
- Biouml.plugins.simulation (plugin) (← links)
- Biouml.plugins.stochastic (plugin) (← links)
- Biouml.plugins.svg (plugin) (← links)
- Biouml.plugins.test (plugin) (← links)
- Biouml.plugins.uniprot (plugin) (← links)
- Biouml.plugins.wiki (plugin) (← links)
- Biouml.plugins.users (plugin) (← links)
- Biouml.workbench.graph (plugin) (← links)
- Biouml.workbench (plugin) (← links)
- Ru.biosoft.access.search (plugin) (← links)
- Ru.biosoft.analysis.optimization (plugin) (← links)
- Ru.biosoft.access (plugin) (← links)
- Ru.biosoft.analysis (plugin) (← links)
- Ru.biosoft.bsa (plugin) (← links)
- Ru.biosoft.galaxy (plugin) (← links)
- Ru.biosoft.graph (plugin) (← links)
- Ru.biosoft.math (plugin) (← links)
- Ru.biosoft.plugins.javascript (plugin) (← links)
- Ru.biosoft.plugins.jri (plugin) (← links)
- Ru.biosoft.server.tomcat (plugin) (← links)
- Ru.biosoft.proteome (plugin) (← links)
- Ru.biosoft.server.servlets (plugin) (← links)
- Ru.biosoft.server (plugin) (← links)
- Ru.biosoft.services (plugin) (← links)
- Ru.biosoft.table (plugin) (← links)
- Ru.biosoft.templates (plugin) (← links)
- Ru.biosoft.treetable (plugin) (← links)
- Ru.biosoft.workbench (plugin) (← links)
- Ru.biosoft.works (plugin) (← links)
- Biouml.plugins.simulation-test (plugin) (← links)
- Category:ISB plugins (← links)
- Affymetrix normalization (analysis) (← links)
- Adaptive simulated annealing (analysis) (← links)
- Add expression values (analysis) (← links)
- GTRD (perspective) (← links)
- Default (perspective) (← links)
- Binding regions summary (analysis) (← links)
- Gathering genome statistics (analysis) (← links)
- Merge binding regions for cell-lines (analysis) (← links)
- Non-merged ChIP-Seq tracks summary (analysis) (← links)
- Cis-module identification (analysis) (← links)
- Count olig frequencies (analysis) (← links)
- Create matrix by mixture of normal components (analysis) (← links)
- Mixture of normal components (analysis) (← links)
- Distinct TF classes (analysis) (← links)
- IPS prediction (analysis) (← links)
- IPS ROC-curves (analysis) (← links)
- Install ExPASy (analysis) (← links)
- Biouml.plugins.expasy (plugin) (← links)
- Extract ribosomal RNA (analysis) (← links)
- ChIP-Seq characteristics distribution (analysis) (← links)
- Biouml.plugins.antimony (plugin) (← links)
- IPS-scores in SNPs (analysis) (← links)
- SNP regions in genome (analysis) (← links)
- SNPs in binding regions (analysis) (← links)
- Biouml.plugins.bindingregions (plugin) (← links)
- Biopath (← links)
- Common and IPS scores correlation (analysis) (← links)
- Ruslan Sharipov (← links)
- Yury Kondrakhin (← links)
- Correlations of best sites (analysis) (← links)
- Locations of best sites (analysis) (← links)
- ROC curves for best sites union (analysis) (← links)
- Clean up SQL database (analysis) (← links)
- Extract RNA length (analysis) (← links)
- MicroRNA finder (analysis) (← links)
- Filter duplicate rows (analysis) (← links)
- Group table rows (analysis) (← links)
- Stem loop predictor (analysis) (← links)
- Join GTRD Tracks (analysis) (← links)
- Prepare Search by regulation (analysis) (← links)
- Search binding sites (analysis) (← links)
- Alexander Buharov (← links)
- Nikita Mandrik (← links)
- Cluster track (analysis) (← links)
- Color space to nucleotide (analysis) (← links)
- Analysis of Binding Regions (analysis) (← links)
- Split fasta (analysis) (← links)
- Peak finders comparison (analysis) (← links)
- Summary on AUCs (analysis) (← links)
- Biouml.plugins.node (plugin) (← links)
- Biouml.plugins.pharm (plugin) (← links)
- Ru.biosoft.graphics (plugin) (← links)
- Check quotas (analysis) (← links)
- Rebuild search indexes (analysis) (← links)
- Blast alignment coverage (analysis) (← links)
- Create profile from site model table (analysis) (← links)
- Mutation effect on sites (analysis) (← links)
- Prepare GTF annotation (analysis) (← links)
- Remove overlapping sites (analysis) (← links)
- Transcript set to track (analysis) (← links)
- CRISPR Cas9 and specific oligonucleotides (analysis) (← links)
- Cis-module sets near given genes (analysis) (← links)
- ChIP-Seq peaks clusterization (analysis) (← links)
- Convert files to tracks (analysis) (← links)
- Filtration of predicted sites by filters (analysis) (← links)
- Identical best site ROC-curves (analysis) (← links)
- Identification of cis-regulatory modules with given pattern of TF-classes (analysis) (← links)
- Matrix comparison (analysis) (← links)
- Identification of composite elements by filters (analysis) (← links)
- Prediction of TF-binding sites of given TF (analysis) (← links)
- ROC-curves in grouped peaks (analysis) (← links)
- ROC-curves in overlapped ChIP-Seq peaks (analysis) (← links)
- ROC-curves in clusterized peaks (analysis) (← links)
- Two multivariate sample analysis (← links)
- Annotate diagram (analysis) (← links)
- Diagram graph compare analysis (← links)
- Remove unobservable molecules (analysis) (← links)
- Share molecules (analysis) (← links)
- ArticleTrackCreator (analysis) (← links)
- CoverageCheker (analysis) (← links)
- FinderArticlePoints (analysis) (← links)
- ArticleComparator (analysis) (← links)
- SVM (analysis) (← links)
- SelectionTrustClusters (analysis) (← links)
- RiboSeqExp (analysis) (← links)
- Differential expression with DESeq (analysis) (← links)
- RiboseqArticleResult (analysis) (← links)
- Biouml.plugins.agilent (plugin) (← links)
- Biouml.plugins.dropbox (plugin) (← links)
- Biouml.plugins.download (plugin) (← links)
- Biouml.plugins.glycan (plugin) (← links)
- Biouml.plugins.googledrive (plugin) (← links)
- Biouml.plugins.mirbase (plugin) (← links)
- Biouml.plugins.riboseqArticleResult (plugin) (← links)
- Biouml.plugins.riboseq (plugin) (← links)
- Ru.biosoft.fs (plugin) (← links)
- Ru.biosoft.bsa.server (plugin) (← links)
- Ru.biosoft.plugins.graph (plugin) (← links)
- Ru.biosoft.vm (plugin) (← links)
- LincRNA and mRNA features (analysis) (← links)
- Copy data element (analysis) (← links)
- Create database from diagram (analysis) (← links)
- Compute profile thresholds (analysis) (← links)
- Count reads in transcripts (analysis) (← links)
- Double encode SOLiD (analysis) (← links)
- Classification analysis (← links)
- Cluster analysis (← links)
- Multivariate regression analysis (← links)
- Multivariate sample analysis (← links)
- Regression analysis (← links)
- Ribo-Seq and mRNA features forming (analysis) (← links)
- Algebraic steady state (analysis) (← links)
- Quasi-Steady-State Analysis (← links)
- Change diagram (analysis) (← links)
- Create state (analysis) (← links)
- Recon transformer (analysis) (← links)
- BuildASiteOffsetTable (analysis) (← links)
- BuildProfileModel (analysis) (← links)
- ComputeTranscriptProfile (analysis) (← links)
- PredictStartSites (analysis) (← links)
- Set initial values from simulation result (analysis) (← links)
- Merge simulation results (analysis) (← links)
- Download model (analysis) (← links)
- Create custom project (analysis) (← links)
- BAM filter multi-hits (analysis) (← links)
- Import HOCOMOCO (analysis) (← links)
- Import ensembl homology (analysis) (← links)
- Compare TFBS mutations (analysis) (← links)
- Convert site search summary (analysis) (← links)
- Get transcripts track (analysis) (← links)
- Site search report (analysis) (← links)
- LS-regression analysis (← links)
- Oligonucleotides in sequence samples (analysis) (← links)
- Matrix derivation (analysis) (← links)
- Univariate samples analysis (← links)
- Colon cancer signature2 (analysis) (← links)
- Colon cancer signature (analysis) (← links)
- Univariate sample analysis (← links)
- Apply events (analysis) (← links)
- Transform track to table (analysis) (← links)
- Parameter identifiability (optimization) (analysis) (← links)
- Parameter fitting (analysis) (← links)
- Key Node Sensitivity Analysis (← links)
- Parameter identifiability (table) (analysis) (← links)
- Score based FBC table builder (analysis) (← links)
- Run a Workflow as Analysis (← links)
- Functional classification by diagrams (analysis) (← links)
- Create flat files (analysis) (← links)
- SEEK Synchronize (analysis) (← links)
- Match genes and metabolites (analysis) (← links)
- Join GTRD clusters (analysis) (← links)
- Make meta tracks (analysis) (← links)
- Merge peak callers (analysis) (← links)
- Merge peaks (analysis) (← links)
- Open tracks for all TF (analysis) (← links)
- Prepare cluster to exp table (analysis) (← links)
- Open per TF view (analysis) (← links)
- Simulate Population (analysis) (← links)
- Sample population (analysis) (← links)
- BAM filter strand specific (analysis) (← links)
- ComputeProfileSums (analysis) (← links)
- Convert genomic BAM to transcriptomic (analysis) (← links)
- Estimate read density (analysis) (← links)
- Large sequence minimal unique length (analysis) (← links)
- Transcript structure analysis (← links)
- Find unmappable regions (analysis) (← links)
- Make GTF for riboseq alignment (analysis) (← links)
- Sequence minimal unique length (analysis) (← links)
- Isoform TE (analysis) (← links)
- Report (analysis) (← links)
- Transcriptome mappability (analysis) (← links)
- Transcriptome minimal unique length (analysis) (← links)
- Plot2D (analysis) (← links)
- Sequence mappability (analysis) (← links)
- Biouml.plugins.ccsignature (plugin) (← links)
- Biouml.plugins.metabolics (plugin) (← links)
- Biouml.plugins.seek (plugin) (← links)
- Install Reactome (analysis) (← links)
- Create miRNA promoters (analysis) (← links)
- Illumina metylation probes to track (analysis) (← links)
- Sort SQL track (analysis) (← links)
- Track correlation (analysis) (← links)
- Data matrix operations (analysis) (← links)
- Fantom analysis (← links)
- GTRD analysis (← links)
- GTRD analysis advanced (analysis) (← links)
- CR cluster selector (analysis) (← links)
- Merge table columns (analysis) (← links)
- Plot bar chart (analysis) (← links)
- Plot pie chart (analysis) (← links)
- Plot scatter chart (analysis) (← links)
- Select random rows (analysis) (← links)
- Select top rows (analysis) (← links)
- Super annotate table (analysis) (← links)
- Transform table (analysis) (← links)
- TreeMap on Functional classification (analysis) (← links)
- ChIP-seq Quality control analysis (← links)
- Encode quality metrics estimation (analysis) (← links)
- Prepare finished tables (analysis) (← links)
- Quality control analysis (← links)
- Quality control metrics (analysis) (← links)
- Report generator for quality control analysis (← links)
- Update pubmed (analysis) (← links)
- Classification analysis advanced (analysis) (← links)
- Regression analysis advanced (analysis) (← links)
- Treatment Simulation (analysis) (← links)
- Mappability histogram (analysis) (← links)
- Quantile normalization (analysis) (← links)
- Table imputation (analysis) (← links)
- Sign test (analysis) (← links)
- Biouml.plugins.mirprom (plugin) (← links)
- Biouml.plugins.machinelearning (plugin) (← links)
- Convert tracks to VCF (analysis) (← links)
- Cistrom construction (analysis) (← links)
- RNA-Seq analysis (← links)
- Model analysis (← links)
- GTEX Mutation effect on sites (analysis) (← links)
- Filtering experiments by cell types (analysis) (← links)
- Mutation effect on sites advanced (analysis) (← links)
- Open regulated genes table (analysis) (← links)
- Search regulated genes (analysis) (← links)
- Site Size Filtering (analysis) (← links)
- AUC Estimation For meta-cluster track (analysis) (← links)
- ChromatinInfo table creation (analysis) (← links)
- Coverage Profiles Cutoff (analysis) (← links)
- Create per TF flat files (analysis) (← links)
- DNase-seq Group and Profile Generation (analysis) (← links)
- DNase-seq Group and Profile Generation (Previous version) (analysis) (← links)
- Export master track (analysis) (← links)
- Export metadata json (analysis) (← links)
- Export per cell clusters (analysis) (← links)
- Find target genes (analysis) (← links)
- Prepare target genes by expression (analysis) (← links)
- Profiles Statistics (analysis) (← links)
- Site Profile Filtering (analysis) (← links)
- Sites Motifs Analysis (← links)
- Sites Open Chromatin Statistics (analysis) (← links)
- Sites Open Chromatin Statistics For Folders (analysis) (← links)
- Sites genome location (analysis) (← links)
- Sites genome location for folders (analysis) (← links)
- TrackInfo table creation (analysis) (← links)
- Update master track (analysis) (← links)
- Compute coverage by window (analysis) (← links)
- Compute coverage profile (analysis) (← links)
- Convert table to VCF track (analysis) (← links)
- Reduce track (analysis) (← links)
- Population generation (analysis) (← links)
- TF binding sites prediction in genome or track (analysis) (← links)
- Add calculated column (analysis) (← links)
- Join two tables (analysis) (← links)
- Generate Table From JSON (analysis) (← links)
- Run analysis (← links)
- Select files from folder (analysis) (← links)
- Stub process file (analysis) (← links)
- Check Workflow consistency (analysis) (← links)