GTRD analysis advanced (analysis)

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Analysis title
Default-analysis-icon.png GTRD analysis advanced
Provider
Institute of Systems Biology
Class
GtrdAnalysisAdvanced
Plugin
biouml.plugins.bindingregions (Binding-regions related analyses)

Description

Analysis of GTRD peaks

Parameters:

  • Option – Select option (Select the concrete session of given analysis).
  • Parameters for OPTION_01 – Please, determine parameters for OPTION_01
    • Species – Select a taxonomical species
    • Path to folder with folders – Path to folder with folders (that contain (ChIP-seq) tracks)
    • Folders names – Select folders names
    • Path to folder with matrices – Path to folder with frequency matrices
  • Parameters for OPTION_2 – Please, determine parameters for OPTION_02
    • Path to folder with folders – Path to folder with folders (that contain (ChIP-seq) tracks)
    • Folders names – Select folders names
  • Parameters for OPTION_3 – Please, determine parameters for OPTION_03
    • Path to folder with folders – Path to folder with folders (that contain (ChIP-seq) tracks)
    • Folders names – Select folders names
  • Path to output folder – Path to output folder
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