Identification of composite elements by filters (analysis)

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Analysis title
Default-analysis-icon.png Identification of composite elements by filters
Provider
Institute of Systems Biology
Class
CompositeElementIdentificationByFiltration
Plugin
biouml.plugins.bindingregions (Binding-regions related analyses)

Description

Identification of composite elements by filters (such as histone modifications)

Parameters:

  • Input track – Select input track (it has to contain the predicted sites)
  • Second input track – Select second input track (it has to contain the predicted sites of second transcription factor)
  • Path to filter track – Path to filter track (can be contain histone modifications)
  • Is filfter track shuffled – Do shuffle the filter track?
  • Chromosome gaps table – Table containing chromosome gaps information (output of "Gathering genome statistics" analysis)
  • Maximal length of filters – Maximal length of filters
  • Maximal distance to edge – Maximal distance to edge
  • Path to output folder – Output folder will be created under this location when it doesn't exist
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