Find target genes (analysis)

Analysis title

Find target genes

Provider

Institute of Systems Biology

Class

FindTargetGenes

Plugin

biouml.plugins.gtrd (GTRD)

Description

Map sites to the whole/promoter region of transcripts/genes and count them.

Parameters:

• Input track – Input track
• ensembl – ensembl
• Map to – Map to
• Interval type – Type of interval used to intersect with input sites
• Upstream – Offset upstream to transcript interval
• Downstream – Offset downstream to transcript interval
• Resulting transcripts – Resulting transcripts