SNPs in binding regions (analysis)
From BioUML platform
- Analysis title
SNPs in binding regions
- Provider
- Institute of Systems Biology
- Class
SNPInBindingRegions- Plugin
- biouml.plugins.bindingregions (Binding-regions related analyses)
Description
This analysis calculates SNPs in binding regions
Parameters:
- Input track – Select input track (it has to contain the merged binding regions; it can be the result of 'Merge binding regions for cell-lines' analysis)
- SNP track – Track containing SNPs (sites must have 'AltAllele' and 'RefAllele' properties)
- TF names table – TF names table (TF class as a row name and TF title in 'tfName' column)
- Output table path – Path to the output table
