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  1. BioUML wiki‏‎ (474,319 views)
  2. Landing‏‎ (212,129 views)
  3. GTRD‏‎ (158,636 views)
  4. BioUML‏‎ (107,952 views)
  5. Antimony‏‎ (95,761 views)
  6. BioUML development history‏‎ (93,205 views)
  7. Covid 19‏‎ (76,178 views)
  8. BioStore‏‎ (56,525 views)
  9. Workflow‏‎ (56,246 views)
  10. BioUML development roadmap‏‎ (56,006 views)
  11. BioUML user interface‏‎ (55,583 views)
  12. Diagram document‏‎ (52,082 views)
  13. Features‏‎ (46,915 views)
  14. Optimization examples‏‎ (46,837 views)
  15. BioNetGen‏‎ (44,530 views)
  16. Download‏‎ (36,126 views)
  17. BioUML server installation‏‎ (34,068 views)
  18. BioUML workbench‏‎ (33,561 views)
  19. BioUML web edition‏‎ (32,716 views)
  20. Simulation‏‎ (29,698 views)
  21. BioUML Development Kit‏‎ (27,599 views)
  22. GTRD statistics‏‎ (26,065 views)
  23. Enrichment analysis‏‎ (23,980 views)
  24. Creating Galaxy tool‏‎ (23,922 views)
  25. Repository pane‏‎ (23,579 views)
  26. GTRD Workflow‏‎ (23,460 views)
  27. Project‏‎ (23,309 views)
  28. GeneXplain‏‎ (22,977 views)
  29. BioUML workbench installation‏‎ (21,870 views)
  30. BioUML team‏‎ (21,547 views)
  31. Databases‏‎ (20,919 views)
  32. Information box‏‎ (20,545 views)
  33. GeneNet‏‎ (18,778 views)
  34. Correlation Analysis‏‎ (18,489 views)
  35. Biomodels‏‎ (18,234 views)
  36. Modular modeling‏‎ (17,995 views)
  37. Presentations‏‎ (17,718 views)
  38. CRC Analysis‏‎ (17,025 views)
  39. Creasemarks analysis‏‎ (16,702 views)
  40. Analysis method development‏‎ (15,909 views)
  41. Hadoop‏‎ (15,822 views)
  42. N-Glycan biosynthesis‏‎ (15,328 views)
  43. Ru.biosoft.bsa (plugin)‏‎ (15,198 views)
  44. Ensembl‏‎ (15,044 views)
  45. MGL‏‎ (15,041 views)
  46. BioUML exceptions‏‎ (14,799 views)
  47. Tests‏‎ (14,485 views)
  48. Visual modeling‏‎ (13,989 views)
  49. PASS analysis‏‎ (13,004 views)
  50. Flux balance analysis‏‎ (12,996 views)
  51. Construct composite modules (analysis)‏‎ (12,726 views)
  52. Mass Conservation Analysis‏‎ (12,711 views)
  53. Galaxy installation‏‎ (12,619 views)
  54. BioUML server‏‎ (12,545 views)
  55. Server ICT‏‎ (12,531 views)
  56. EMBL format‏‎ (12,453 views)
  57. Diagram type‏‎ (12,383 views)
  58. Perspective‏‎ (12,351 views)
  59. Metabolic Control Analysis‏‎ (12,300 views)
  60. R installation‏‎ (11,991 views)
  61. Viewpart‏‎ (11,718 views)
  62. Rbiouml‏‎ (11,692 views)
  63. BioUML format‏‎ (11,670 views)
  64. Flux Balance Constraint (analysis)‏‎ (11,663 views)
  65. Cross cost grid layout‏‎ (11,551 views)
  66. Agilent normalization (analysis)‏‎ (11,361 views)
  67. CloudMan‏‎ (11,312 views)
  68. Biopath‏‎ (11,301 views)
  69. Acknowledgements‏‎ (11,238 views)
  70. Diagram editing history‏‎ (11,211 views)
  71. Hypergeometric analysis‏‎ (11,196 views)
  72. BED format‏‎ (11,154 views)
  73. Construct composite modules on tracks (analysis)‏‎ (11,044 views)
  74. Optimization problem‏‎ (10,998 views)
  75. Motif quality analysis‏‎ (10,956 views)
  76. Fasta format‏‎ (10,780 views)
  77. Overall circulation model‏‎ (10,756 views)
  78. New BioStore‏‎ (10,696 views)
  79. GTRD comparison‏‎ (10,556 views)
  80. Quadratic Hill-climbing (analysis)‏‎ (10,503 views)
  81. ChIPMunk (analysis)‏‎ (10,441 views)
  82. Functional classification (analysis)‏‎ (10,314 views)
  83. Table document‏‎ (10,279 views)
  84. Force directed layout‏‎ (10,246 views)
  85. Effector search (analysis)‏‎ (10,212 views)
  86. Adaptive simulated annealing (analysis)‏‎ (10,179 views)
  87. ChIPHorde (analysis)‏‎ (10,111 views)
  88. Defines.js‏‎ (10,024 views)
  89. Regulator search (analysis)‏‎ (9,922 views)
  90. BioUML installation‏‎ (9,877 views)
  91. Graph search‏‎ (9,868 views)
  92. Hierarchical layout‏‎ (9,843 views)
  93. BioBlend‏‎ (9,801 views)
  94. Transplorer‏‎ (9,686 views)
  95. Lucene indexes creation‏‎ (9,608 views)
  96. Biouml.plugins.gtrd (plugin)‏‎ (9,602 views)
  97. Repository pane toolbar‏‎ (9,537 views)
  98. Meta analysis‏‎ (9,515 views)
  99. Search tools‏‎ (9,480 views)
  100. Reactions Analysis‏‎ (9,427 views)
  101. Galaxy cloud‏‎ (9,353 views)
  102. Gene Ontology‏‎ (9,351 views)
  103. GenBank format‏‎ (9,320 views)
  104. Copy folder (analysis)‏‎ (9,300 views)
  105. Simulation analysis‏‎ (9,274 views)
  106. DiChIPHorde (analysis)‏‎ (9,243 views)
  107. Site search on track (analysis)‏‎ (9,236 views)
  108. Install TRANSFAC(R) database (analysis)‏‎ (9,180 views)
  109. Composite module to proteins (analysis)‏‎ (9,138 views)
  110. Filter table (analysis)‏‎ (9,136 views)
  111. GLBSOLVE (analysis)‏‎ (9,083 views)
  112. SIF (file format)‏‎ (9,077 views)
  113. Geneways‏‎ (9,043 views)
  114. Diagram (element type)‏‎ (9,035 views)
  115. Sensitivity Analysis‏‎ (8,970 views)
  116. DiChIPMunk (analysis)‏‎ (8,935 views)
  117. Ru.biosoft.access (plugin)‏‎ (8,921 views)
  118. TRRD‏‎ (8,905 views)
  119. Gene features (analysis)‏‎ (8,901 views)
  120. Bowtie (analysis)‏‎ (8,880 views)
  121. Compare site models (analysis)‏‎ (8,849 views)
  122. Compare Experiments (analysis)‏‎ (8,838 views)
  123. Breakdancer output (file format)‏‎ (8,799 views)
  124. Using R in BioUML‏‎ (8,784 views)
  125. Apply state to diagram (analysis)‏‎ (8,766 views)
  126. Affymetrix normalization (analysis)‏‎ (8,677 views)
  127. Wiggle format‏‎ (8,672 views)
  128. BioNetGen language format‏‎ (8,597 views)
  129. Gene Transfer Format‏‎ (8,587 views)
  130. Virtual rat‏‎ (8,550 views)
  131. Repository‏‎ (8,538 views)
  132. Annotate track with genes (analysis)‏‎ (8,524 views)
  133. Modular model of the human CVS v.1‏‎ (8,472 views)
  134. Descrete events‏‎ (8,460 views)
  135. Image file‏‎ (8,410 views)
  136. Servers‏‎ (8,406 views)
  137. SBML (file format)‏‎ (8,401 views)
  138. Add expression values (analysis)‏‎ (8,372 views)
  139. Preprocess raw reads (analysis)‏‎ (8,362 views)
  140. CNVnator genotype output (file format)‏‎ (8,343 views)
  141. Chromosome enrichment (analysis)‏‎ (8,327 views)
  142. Using Galaxy in BioUML‏‎ (8,294 views)
  143. Gene set to track (analysis)‏‎ (8,261 views)
  144. Convert table to track (analysis)‏‎ (8,239 views)
  145. Create DAS track (analysis)‏‎ (8,215 views)
  146. Create IPS model (analysis)‏‎ (8,184 views)
  147. Polynomial Regression analysis‏‎ (8,179 views)
  148. Annotate table (analysis)‏‎ (8,175 views)
  149. Cluster analysis by K-means (analysis)‏‎ (8,148 views)
  150. ChIP-seq peak profile (analysis)‏‎ (8,136 views)
  151. Cluster by shortest path (analysis)‏‎ (8,106 views)
  152. Ru.biosoft.proteome (plugin)‏‎ (8,100 views)
  153. Read counter (analysis)‏‎ (8,091 views)
  154. Convert table (analysis)‏‎ (8,081 views)
  155. Building Flux Balance DataTable (analysis)‏‎ (8,059 views)
  156. GeneXplain GmbH‏‎ (8,051 views)
  157. Ensembl installation‏‎ (7,998 views)
  158. HTML file‏‎ (7,961 views)
  159. Tools Comparison 2022‏‎ (7,951 views)
  160. Genome coverage (analysis)‏‎ (7,904 views)
  161. Text file‏‎ (7,880 views)
  162. Change profile cutoffs (analysis)‏‎ (7,864 views)
  163. Join tracks (analysis)‏‎ (7,839 views)
  164. Export element (analysis)‏‎ (7,834 views)
  165. Ru.biosoft.analysis (plugin)‏‎ (7,805 views)
  166. Evolution strategy (SRES) (analysis)‏‎ (7,798 views)
  167. General Feature Format‏‎ (7,787 views)
  168. MicroRNA aligner (analysis)‏‎ (7,759 views)
  169. Cellular genetic algorithm (analysis)‏‎ (7,740 views)
  170. Analysis of Cis-Regulatory Modules (analysis)‏‎ (7,720 views)
  171. Linear Shifted Model (analysis)‏‎ (7,717 views)
  172. Filter one track by another (analysis)‏‎ (7,667 views)
  173. Interval format‏‎ (7,649 views)
  174. Grid layout‏‎ (7,639 views)
  175. Create folder (analysis)‏‎ (7,637 views)
  176. Particle swarm optimization (analysis)‏‎ (7,607 views)
  177. Institute of Systems Biology‏‎ (7,604 views)
  178. Process track with sites (analysis)‏‎ (7,601 views)
  179. Biouml.plugins.ensembl (plugin)‏‎ (7,568 views)
  180. Install TRANSPATH(R) database (analysis)‏‎ (7,547 views)
  181. Convert site models to proteins (analysis)‏‎ (7,468 views)
  182. Biouml.plugins.cma (plugin)‏‎ (7,461 views)
  183. Construct IPS CisModule (analysis)‏‎ (7,457 views)
  184. Extend network (analysis)‏‎ (7,449 views)
  185. Disease - MeSH‏‎ (7,412 views)
  186. Biouml.plugins.bionetgen (plugin)‏‎ (7,376 views)
  187. Create profile from gene table (analysis)‏‎ (7,356 views)
  188. Convert table via homology (analysis)‏‎ (7,348 views)
  189. Join several tables (analysis)‏‎ (7,342 views)
  190. GO installation‏‎ (7,327 views)
  191. Filter track by condition (analysis)‏‎ (7,323 views)
  192. Biouml.workbench (plugin)‏‎ (7,316 views)
  193. Gene overlap statistics (analysis)‏‎ (7,260 views)
  194. Heterozygous site caller (analysis)‏‎ (7,252 views)
  195. SED-ML file‏‎ (7,249 views)
  196. Create Match model (analysis)‏‎ (7,207 views)
  197. Join table (analysis)‏‎ (7,179 views)
  198. Generic file‏‎ (7,149 views)
  199. Nonlinear Model (analysis)‏‎ (7,118 views)
  200. Ru.biosoft.table (plugin)‏‎ (7,092 views)
  201. Diagram view part (extension point)‏‎ (7,056 views)
  202. Create weight matrix model (analysis)‏‎ (7,003 views)
  203. VCF format‏‎ (6,959 views)
  204. SDE model (analysis)‏‎ (6,918 views)
  205. Steady State (analysis)‏‎ (6,878 views)
  206. Gene expression prediction‏‎ (6,872 views)
  207. Biouml.plugins.bindingregions (plugin)‏‎ (6,864 views)
  208. HumanSim‏‎ (6,814 views)
  209. Merge track statistics (analysis)‏‎ (6,806 views)
  210. Biouml.plugins.bkl (plugin)‏‎ (6,799 views)
  211. SAM or BAM alignment file‏‎ (6,784 views)
  212. Orthogonal layout‏‎ (6,750 views)
  213. Biouml.plugins.cellml (plugin)‏‎ (6,718 views)
  214. Matching BioHub‏‎ (6,711 views)
  215. Fastq format‏‎ (6,700 views)
  216. SNP matching (analysis)‏‎ (6,583 views)
  217. Save hits (analysis)‏‎ (6,581 views)
  218. Venn diagrams (analysis)‏‎ (6,516 views)
  219. Biouml.plugins.chipmunk (plugin)‏‎ (6,510 views)
  220. Site distribution (analysis)‏‎ (6,498 views)
  221. IPS motif discovery (analysis)‏‎ (6,478 views)
  222. Illumina normalization (analysis)‏‎ (6,471 views)
  223. Genes - GenBank‏‎ (6,459 views)
  224. 1-dimensional arterial tree model‏‎ (6,445 views)
  225. Ru.biosoft.galaxy (plugin)‏‎ (6,430 views)
  226. Modular model of the human CVS v.2‏‎ (6,416 views)
  227. Mutation effect (analysis)‏‎ (6,408 views)
  228. Ru.biosoft.server (plugin)‏‎ (6,389 views)
  229. Analyze promoters (TRANSFAC(R)) (workflow)‏‎ (6,304 views)
  230. Biouml.plugins.pass (plugin)‏‎ (6,270 views)
  231. Image (element type)‏‎ (6,223 views)
  232. Script viewpart‏‎ (6,218 views)
  233. Ru.biosoft.workbench (plugin)‏‎ (6,216 views)
  234. Fold-Change calculation (analysis)‏‎ (6,191 views)
  235. Biouml.plugins.creasemarks (plugin)‏‎ (6,188 views)
  236. Biouml.plugins.das (plugin)‏‎ (6,156 views)
  237. CloudBioLinux‏‎ (6,143 views)
  238. Run MACS 1.3.7 on ChiP-Seq (analysis)‏‎ (6,131 views)
  239. Genes - Ensembl‏‎ (6,129 views)
  240. Save network (analysis)‏‎ (6,112 views)
  241. JVODE‏‎ (6,103 views)
  242. SDF file‏‎ (6,102 views)
  243. Join diagrams (analysis)‏‎ (6,096 views)
  244. Upload from FTP (analysis)‏‎ (6,074 views)
  245. Method (extension point)‏‎ (6,058 views)
  246. Biouml.plugins.enrichment (plugin)‏‎ (6,047 views)
  247. Collaborative diagram editing‏‎ (6,005 views)
  248. Biouml.plugins.endonet (plugin)‏‎ (5,964 views)
  249. Biouml.plugins.fbc (plugin)‏‎ (5,950 views)
  250. Biouml.plugins.transfac (plugin)‏‎ (5,911 views)
  251. Proteins - IPI‏‎ (5,864 views)
  252. Genes - Entrez‏‎ (5,855 views)
  253. TRANSFAC matrices format‏‎ (5,854 views)
  254. Biouml.plugins.modelreduction (plugin)‏‎ (5,851 views)
  255. Biouml.plugins.sbml (plugin)‏‎ (5,834 views)
  256. Biouml.plugins.reactome (plugin)‏‎ (5,809 views)
  257. SISSRs output (file format)‏‎ (5,809 views)
  258. Track statistics (analysis)‏‎ (5,803 views)
  259. Host object (extension point)‏‎ (5,787 views)
  260. Map to Transpath (analysis)‏‎ (5,785 views)
  261. Biouml.plugins.go (plugin)‏‎ (5,783 views)
  262. Track coverage (analysis)‏‎ (5,718 views)
  263. GinSim (file format)‏‎ (5,701 views)
  264. Ru.biosoft.graph (plugin)‏‎ (5,701 views)
  265. Biouml.plugins.bowtie (plugin)‏‎ (5,645 views)
  266. to user communication‏‎ (5,619 views)
  267. Pindel output (file format)‏‎ (5,594 views)
  268. Ru.biosoft.plugins.jri (plugin)‏‎ (5,592 views)
  269. Fastq mcf‏‎ (5,526 views)
  270. Binding regions summary (analysis)‏‎ (5,520 views)
  271. General control panel‏‎ (5,517 views)
  272. CellML (file format)‏‎ (5,512 views)
  273. Export (extension point)‏‎ (5,490 views)
  274. Proteins - UniProt‏‎ (5,483 views)
  275. Ru.biosoft.analysis.optimization (plugin)‏‎ (5,455 views)
  276. Tabular (file format)‏‎ (5,442 views)
  277. Biouml.plugins.keynodes (plugin)‏‎ (5,396 views)
  278. Biouml.plugins.chemoinformatics (plugin)‏‎ (5,391 views)
  279. Stoichiometric Matrix (analysis)‏‎ (5,344 views)
  280. Biouml.plugins.obo (plugin)‏‎ (5,343 views)
  281. Site search on gene set (analysis)‏‎ (5,330 views)
  282. Visualize results (analysis)‏‎ (5,323 views)
  283. Create matrix by mixture of normal components (analysis)‏‎ (5,320 views)
  284. Tools Comparison‏‎ (5,307 views)
  285. Biouml.plugins.optimization (plugin)‏‎ (5,273 views)
  286. Biouml.plugins.sbw (plugin)‏‎ (5,257 views)
  287. ChIP-Seq characteristics distribution (analysis)‏‎ (5,242 views)
  288. Run MACS 1.4.0 on ChiP-Seq (analysis)‏‎ (5,226 views)
  289. Reference type‏‎ (5,216 views)
  290. Site counts in repeats (analysis)‏‎ (5,201 views)
  291. Parameter identifiability example‏‎ (5,195 views)
  292. Databases installation‏‎ (5,188 views)
  293. Biouml.plugins.transpath (plugin)‏‎ (5,184 views)
  294. Euler‏‎ (5,182 views)
  295. Document pane‏‎ (5,181 views)
  296. Biouml.plugins.sedml (plugin)‏‎ (5,121 views)
  297. SBML(CellDesigner) (file format)‏‎ (5,120 views)
  298. Site search result optimization (analysis)‏‎ (5,116 views)
  299. Genome browser‏‎ (5,108 views)
  300. Common class (extension point)‏‎ (5,105 views)
  301. Classification hub‏‎ (5,101 views)
  302. Count olig frequencies (analysis)‏‎ (5,057 views)
  303. Categories - GTRD‏‎ (5,032 views)
  304. Track to gene set (analysis)‏‎ (5,031 views)
  305. Ru.biosoft.server.servlets (plugin)‏‎ (4,977 views)
  306. Autosome.Ru‏‎ (4,958 views)
  307. Biouml.plugins.simulation (plugin)‏‎ (4,952 views)
  308. Reactome‏‎ (4,946 views)
  309. Ru.biosoft.templates (plugin)‏‎ (4,944 views)
  310. Classification analysis‏‎ (4,942 views)
  311. Ru.biosoft.plugins.javascript (plugin)‏‎ (4,940 views)
  312. IPS ROC-curves (analysis)‏‎ (4,924 views)
  313. Proteins - Ensembl‏‎ (4,909 views)
  314. Biouml.plugins.sabiork (plugin)‏‎ (4,899 views)
  315. Matrix (element type)‏‎ (4,896 views)
  316. Up and Down Identification (analysis)‏‎ (4,884 views)
  317. Biouml.plugins.agentmodeling (plugin)‏‎ (4,881 views)
  318. Biouml.plugins.geneways (plugin)‏‎ (4,873 views)
  319. Biouml.plugins.microarray (plugin)‏‎ (4,868 views)
  320. Biouml.plugins.ginsim (plugin)‏‎ (4,857 views)
  321. Biouml.plugins.graphml (plugin)‏‎ (4,857 views)
  322. Proteins - Reactome‏‎ (4,840 views)
  323. Proteins - RefSeq‏‎ (4,838 views)
  324. Biouml.plugins.gne (plugin)‏‎ (4,824 views)
  325. Locations of best sites (analysis)‏‎ (4,819 views)
  326. Transcripts - Ensembl‏‎ (4,816 views)
  327. Biouml.plugins.genemodels (plugin)‏‎ (4,790 views)
  328. Biouml.plugins.users (plugin)‏‎ (4,790 views)
  329. Ru.biosoft.works (plugin)‏‎ (4,782 views)
  330. Biouml.plugins.expression (plugin)‏‎ (4,777 views)
  331. Biouml.plugins.kegg (plugin)‏‎ (4,758 views)
  332. Biouml.plugins.illumina (plugin)‏‎ (4,756 views)
  333. KeyNodes hub‏‎ (4,756 views)
  334. Biouml.plugins.matlab (plugin)‏‎ (4,754 views)
  335. Validate Experiments (analysis)‏‎ (4,737 views)
  336. Mixture of normal components (analysis)‏‎ (4,733 views)
  337. Cell type specific TFBS prediction‏‎ (4,716 views)
  338. TRANSFAC profile (file format)‏‎ (4,714 views)
  339. Correlations of best sites (analysis)‏‎ (4,712 views)
  340. ChIP-seq peaks - GTRD‏‎ (4,684 views)
  341. Ru.biosoft.access.search (plugin)‏‎ (4,683 views)
  342. Table (element type)‏‎ (4,682 views)
  343. GC island finder (analysis)‏‎ (4,661 views)
  344. Ru.biosoft.server.tomcat (plugin)‏‎ (4,637 views)
  345. Cell - EndoNet‏‎ (4,630 views)
  346. Probes - Affymetrix‏‎ (4,614 views)
  347. BioUML - systems biology‏‎ (4,582 views)
  348. Hash parameters‏‎ (4,580 views)
  349. Biouml.plugins.uniprot (plugin)‏‎ (4,578 views)
  350. Biouml.plugins.simulation-test (plugin)‏‎ (4,546 views)
  351. Site search summary (analysis)‏‎ (4,542 views)
  352. Biouml.plugins.wiki (plugin)‏‎ (4,539 views)
  353. Biouml.workbench.graph (plugin)‏‎ (4,539 views)
  354. Com.developmentontheedge.util (plugin)‏‎ (4,535 views)
  355. Ru.biosoft.math (plugin)‏‎ (4,535 views)
  356. Ru.biosoft.services (plugin)‏‎ (4,529 views)
  357. Cluster analysis‏‎ (4,508 views)
  358. Biouml.plugins.psimi (plugin)‏‎ (4,507 views)
  359. Biouml.plugins.lucene (plugin)‏‎ (4,502 views)
  360. Biouml.plugins.biopax (plugin)‏‎ (4,498 views)
  361. Analyze promoters (GTRD) (workflow)‏‎ (4,488 views)
  362. Distinct TF classes (analysis)‏‎ (4,480 views)
  363. Biouml.plugins.svg (plugin)‏‎ (4,479 views)
  364. Biouml.plugins.softberry (plugin)‏‎ (4,477 views)
  365. Select table columns (analysis)‏‎ (4,468 views)
  366. Biouml.plugins.test (plugin)‏‎ (4,460 views)
  367. Genes - Unigene‏‎ (4,446 views)
  368. BioGears‏‎ (4,445 views)
  369. Find master regulators for multiple gene sets (TRANSPATH(R)) (workflow)‏‎ (4,433 views)
  370. Biouml.plugins.proteinmodel (plugin)‏‎ (4,412 views)
  371. Biouml.plugins.gxl (plugin)‏‎ (4,407 views)
  372. Biouml.plugins.hemodynamics (plugin)‏‎ (4,407 views)
  373. Biouml.plugins.research (plugin)‏‎ (4,398 views)
  374. ZIP-archive (file format)‏‎ (4,396 views)
  375. Biouml.plugins.sbgn (plugin)‏‎ (4,394 views)
  376. ChIP-Seq - Identify TF binding sites on peaks (TRANSFAC(R)) (workflow)‏‎ (4,392 views)
  377. Cis-module identification (analysis)‏‎ (4,382 views)
  378. BioHub‏‎ (4,376 views)
  379. Ru.biosoft.treetable (plugin)‏‎ (4,371 views)
  380. Element type‏‎ (4,358 views)
  381. Long-term model of the CVS/Renal system‏‎ (4,337 views)
  382. Gathering genome statistics (analysis)‏‎ (4,335 views)
  383. ChIP-seq Analysis‏‎ (4,311 views)
  384. Proteins - GenBank‏‎ (4,308 views)
  385. Pathways - Transpath‏‎ (4,301 views)
  386. Text output file generated by R (file format)‏‎ (4,301 views)
  387. Varscan output (file format)‏‎ (4,253 views)
  388. Biouml.plugins.genenet (plugin)‏‎ (4,246 views)
  389. Extract ribosomal RNA (analysis)‏‎ (4,244 views)
  390. Biouml.plugins.server (plugin)‏‎ (4,241 views)
  391. Probes - Agilent‏‎ (4,190 views)
  392. Hormone - EndoNet‏‎ (4,168 views)
  393. Research diagram‏‎ (4,164 views)
  394. Glycan structures‏‎ (4,160 views)
  395. Pathways - Reactome‏‎ (4,158 views)
  396. Biouml.plugins.expasy (plugin)‏‎ (4,153 views)
  397. Gene set enrichment analysis (Illumina probes) (workflow)‏‎ (4,152 views)
  398. Biouml.plugins.stochastic (plugin)‏‎ (4,136 views)
  399. Cluster track (analysis)‏‎ (4,112 views)
  400. Isoforms - GTRD‏‎ (4,112 views)
  401. Genes - Gene symbol‏‎ (4,101 views)
  402. Compute differentially expressed genes using Hypergeometric test (Affymetrix probes) (workflow)‏‎ (4,084 views)
  403. Biouml.plugins.chebi (plugin)‏‎ (4,080 views)
  404. ROC curves for best sites union (analysis)‏‎ (4,074 views)
  405. Non-merged ChIP-Seq tracks summary (analysis)‏‎ (4,064 views)
  406. Softberry, Inc.‏‎ (4,063 views)
  407. VAT output (file format)‏‎ (4,060 views)
  408. Com.developmentontheedge.server (plugin)‏‎ (4,039 views)
  409. Template (extension point)‏‎ (4,037 views)
  410. File (element type)‏‎ (4,022 views)
  411. ChIP-Seq - Identify TF binding sites on peaks for multiple datasets (TRANSFAC(R)) (workflow)‏‎ (4,016 views)
  412. Transcripts - RefSeq‏‎ (4,012 views)
  413. Biouml.plugins.miriam (plugin)‏‎ (4,007 views)
  414. Add reactants (analysis)‏‎ (4,000 views)
  415. Mapping to ontologies for multiple gene sets (workflow)‏‎ (3,994 views)
  416. Site model (element type)‏‎ (3,994 views)
  417. Mapping to ontologies for multiple gene sets (TRANSPATH(R)) (workflow)‏‎ (3,992 views)
  418. Common and IPS scores correlation (analysis)‏‎ (3,971 views)
  419. Biouml.plugins.reactome.biohub (plugin)‏‎ (3,963 views)
  420. Merge binding regions for cell-lines (analysis)‏‎ (3,955 views)
  421. Compute differentially expressed genes (Affymetrix probes) (workflow)‏‎ (3,951 views)
  422. BioPAX file‏‎ (3,944 views)
  423. Mapping to ontologies (TRANSPATH(R)) (workflow)‏‎ (3,918 views)
  424. Categories - ExPASy‏‎ (3,917 views)
  425. Biouml.plugins.pharm (plugin)‏‎ (3,914 views)
  426. DDMoRe consortium‏‎ (3,909 views)
  427. Compute differentially expressed genes using Hypergeometric test (Illumina probes) (workflow)‏‎ (3,900 views)
  428. Biouml.plugins.perfectosape (plugin)‏‎ (3,897 views)
  429. Matrices - GTRD‏‎ (3,890 views)
  430. IPS prediction (analysis)‏‎ (3,884 views)
  431. Analyze SNP list (TRANSFAC(R)) (workflow)‏‎ (3,868 views)
  432. Server administrator‏‎ (3,855 views)
  433. Site models - GTRD‏‎ (3,853 views)
  434. Gene set enrichment analysis (Affymetrix probes) (workflow)‏‎ (3,847 views)
  435. Tutorials‏‎ (3,829 views)
  436. Compute differentially expressed genes (Agilent probes) (workflow)‏‎ (3,805 views)
  437. Biouml.plugins.mirbase (plugin)‏‎ (3,801 views)
  438. Method description HTML file‏‎ (3,793 views)
  439. Tree-table (element type)‏‎ (3,793 views)
  440. Track (element type)‏‎ (3,788 views)
  441. Virtual physiological human‏‎ (3,784 views)
  442. Contributors‏‎ (3,780 views)
  443. Biouml.plugins.antimony (plugin)‏‎ (3,773 views)
  444. Analyze SNP list (GTRD) (workflow)‏‎ (3,759 views)
  445. Perspective (extension point)‏‎ (3,753 views)
  446. Sequence (element type)‏‎ (3,736 views)
  447. Analysis of Binding Regions (analysis)‏‎ (3,727 views)
  448. Install ExPASy (analysis)‏‎ (3,718 views)
  449. Apply CMA model to tracks (analysis)‏‎ (3,704 views)
  450. Compute differentially expressed genes (Illumina probes) (workflow)‏‎ (3,702 views)
  451. Sensitivity analysis example‏‎ (3,684 views)
  452. ChIP-Seq - Identify composite modules on peaks (TRANSFAC(R)) (workflow)‏‎ (3,655 views)
  453. Annotate diagram (analysis)‏‎ (3,652 views)
  454. Biouml.plugins.affymetrix (plugin)‏‎ (3,650 views)
  455. Probes - Illumina‏‎ (3,641 views)
  456. Beans (extension point)‏‎ (3,633 views)
  457. Biouml.plugins.node (plugin)‏‎ (3,626 views)
  458. ChIP-Seq peaks clusterization (analysis)‏‎ (3,620 views)
  459. Matrices - TRANSFAC‏‎ (3,599 views)
  460. Quasi-Steady-State Analysis‏‎ (3,599 views)
  461. Data (host object)‏‎ (3,598 views)
  462. Expression mapping‏‎ (3,556 views)
  463. Compute differentially expressed genes using Hypergeometric test (Agilent probes) (workflow)‏‎ (3,553 views)
  464. ChIP-Seq - Identify and classify target genes (workflow)‏‎ (3,542 views)
  465. Product‏‎ (3,522 views)
  466. Diagram graph compare analysis‏‎ (3,518 views)
  467. Short term model of the heart output regulation‏‎ (3,497 views)
  468. Find common effectors in networks (GeneWays) (workflow)‏‎ (3,469 views)
  469. Biouml.plugins.riboseq (plugin)‏‎ (3,467 views)
  470. Text (element type)‏‎ (3,449 views)
  471. Reference type (extension point)‏‎ (3,435 views)
  472. Convert files to tracks (analysis)‏‎ (3,417 views)
  473. Antimony (file format)‏‎ (3,416 views)
  474. ArticleComparator (analysis)‏‎ (3,400 views)
  475. Moved class (extension point)‏‎ (3,396 views)
  476. Virtual biology‏‎ (3,394 views)
  477. Identical best site ROC-curves (analysis)‏‎ (3,392 views)
  478. BuildASiteOffsetTable (analysis)‏‎ (3,369 views)
  479. Transformer (extension point)‏‎ (3,369 views)
  480. Join GTRD Tracks (analysis)‏‎ (3,367 views)
  481. Plugin development‏‎ (3,360 views)
  482. BuildProfileModel (analysis)‏‎ (3,345 views)
  483. Genes - BKL‏‎ (3,337 views)
  484. Probes - Affymetrix ST‏‎ (3,332 views)
  485. Genes - Transpath‏‎ (3,331 views)
  486. Color space to nucleotide (analysis)‏‎ (3,328 views)
  487. ChIPMunk (perspective)‏‎ (3,325 views)
  488. PharmML‏‎ (3,324 views)
  489. Application log (viewpart)‏‎ (3,322 views)
  490. RADAU V‏‎ (3,319 views)
  491. Extract RNA length (analysis)‏‎ (3,298 views)
  492. ComputeTranscriptProfile (analysis)‏‎ (3,291 views)
  493. Gene set enrichment analysis (Agilent probes) (workflow)‏‎ (3,288 views)
  494. Blast alignment coverage (analysis)‏‎ (3,277 views)
  495. SEDX archive (file format)‏‎ (3,276 views)
  496. Biouml.plugins.agilent (plugin)‏‎ (3,268 views)
  497. Genes - Illumina‏‎ (3,260 views)
  498. Drugs - DrugBank‏‎ (3,238 views)
  499. ArticleTrackCreator (analysis)‏‎ (3,236 views)
  500. Look and feel (extension point)‏‎ (3,236 views)

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