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- Construct composite modules (analysis) (12,741 views)
- Mass Conservation Analysis (12,711 views)
- Galaxy installation (12,625 views)
- BioUML server (12,546 views)
- Server ICT (12,535 views)
- EMBL format (12,470 views)
- Diagram type (12,392 views)
- Perspective (12,363 views)
- Metabolic Control Analysis (12,302 views)
- R installation (11,992 views)
- Viewpart (11,718 views)
- Rbiouml (11,700 views)
- BioUML format (11,671 views)
- Flux Balance Constraint (analysis) (11,663 views)
- Cross cost grid layout (11,557 views)
- Agilent normalization (analysis) (11,361 views)
- CloudMan (11,315 views)
- Biopath (11,301 views)
- Acknowledgements (11,241 views)
- Diagram editing history (11,216 views)
- Hypergeometric analysis (11,215 views)
- BED format (11,156 views)
- Construct composite modules on tracks (analysis) (11,101 views)
- Optimization problem (11,012 views)
- Motif quality analysis (10,963 views)
- Fasta format (10,785 views)
- Overall circulation model (10,759 views)
- New BioStore (10,700 views)
- GTRD comparison (10,570 views)
- Quadratic Hill-climbing (analysis) (10,506 views)
- ChIPMunk (analysis) (10,442 views)
- Functional classification (analysis) (10,314 views)
- Table document (10,283 views)
- Force directed layout (10,250 views)
- Effector search (analysis) (10,224 views)
- Adaptive simulated annealing (analysis) (10,183 views)
- ChIPHorde (analysis) (10,123 views)
- Defines.js (10,026 views)
- Regulator search (analysis) (9,925 views)
- BioUML installation (9,879 views)
- Graph search (9,879 views)
- Hierarchical layout (9,846 views)
- BioBlend (9,801 views)
- Transplorer (9,689 views)
- Biouml.plugins.gtrd (plugin) (9,661 views)
- Lucene indexes creation (9,613 views)
- Repository pane toolbar (9,542 views)
- Meta analysis (9,515 views)
- Search tools (9,486 views)
- Reactions Analysis (9,428 views)
- Galaxy cloud (9,355 views)
- Gene Ontology (9,353 views)
- GenBank format (9,321 views)
- Copy folder (analysis) (9,303 views)
- Simulation analysis (9,275 views)
- DiChIPHorde (analysis) (9,255 views)
- Site search on track (analysis) (9,240 views)
- Install TRANSFAC(R) database (analysis) (9,180 views)
- Composite module to proteins (analysis) (9,179 views)
- Filter table (analysis) (9,155 views)
- GLBSOLVE (analysis) (9,083 views)
- SIF (file format) (9,077 views)
- Diagram (element type) (9,045 views)
- Geneways (9,044 views)
- Sensitivity Analysis (8,972 views)
- DiChIPMunk (analysis) (8,942 views)
- Bowtie (analysis) (8,935 views)
- Ru.biosoft.access (plugin) (8,921 views)
- TRRD (8,907 views)
- Gene features (analysis) (8,901 views)
- Compare site models (analysis) (8,850 views)
- Compare Experiments (analysis) (8,844 views)
- Breakdancer output (file format) (8,801 views)
- Using R in BioUML (8,790 views)
- Apply state to diagram (analysis) (8,767 views)
- Affymetrix normalization (analysis) (8,678 views)
- Wiggle format (8,676 views)
- BioNetGen language format (8,602 views)
- Gene Transfer Format (8,589 views)
- Virtual rat (8,550 views)
- Repository (8,541 views)
- Annotate track with genes (analysis) (8,525 views)
- Modular model of the human CVS v.1 (8,472 views)
- Descrete events (8,467 views)
- Image file (8,410 views)
- Servers (8,410 views)
- SBML (file format) (8,401 views)
- Add expression values (analysis) (8,377 views)
- Preprocess raw reads (analysis) (8,370 views)
- Chromosome enrichment (analysis) (8,363 views)
- CNVnator genotype output (file format) (8,344 views)
- Using Galaxy in BioUML (8,328 views)
- Gene set to track (analysis) (8,262 views)
- Convert table to track (analysis) (8,244 views)
- Create DAS track (analysis) (8,218 views)
- Create IPS model (analysis) (8,211 views)
- Polynomial Regression analysis (8,184 views)
- Annotate table (analysis) (8,179 views)
- ChIP-seq peak profile (analysis) (8,164 views)
- Cluster analysis by K-means (analysis) (8,148 views)
- Cluster by shortest path (analysis) (8,106 views)
- Ru.biosoft.proteome (plugin) (8,102 views)
- Read counter (analysis) (8,098 views)
- Convert table (analysis) (8,081 views)
- Tools Comparison 2022 (8,066 views)
- Building Flux Balance DataTable (analysis) (8,059 views)
- GeneXplain GmbH (8,052 views)
- Ensembl installation (8,004 views)
- HTML file (7,977 views)
- Genome coverage (analysis) (7,907 views)
- Text file (7,881 views)
- Ru.biosoft.analysis (plugin) (7,875 views)
- Change profile cutoffs (analysis) (7,865 views)
- Join tracks (analysis) (7,841 views)
- Export element (analysis) (7,840 views)
- Evolution strategy (SRES) (analysis) (7,800 views)
- General Feature Format (7,787 views)
- MicroRNA aligner (analysis) (7,767 views)
- Cellular genetic algorithm (analysis) (7,766 views)
- Analysis of Cis-Regulatory Modules (analysis) (7,739 views)
- Linear Shifted Model (analysis) (7,717 views)
- Filter one track by another (analysis) (7,712 views)
- Interval format (7,650 views)
- Create folder (analysis) (7,645 views)
- Process track with sites (analysis) (7,644 views)
- Grid layout (7,642 views)
- Institute of Systems Biology (7,619 views)
- Particle swarm optimization (analysis) (7,609 views)
- Biouml.plugins.ensembl (plugin) (7,581 views)
- Install TRANSPATH(R) database (analysis) (7,558 views)
- Convert site models to proteins (analysis) (7,477 views)
- Construct IPS CisModule (analysis) (7,467 views)
- Extend network (analysis) (7,466 views)
- Biouml.plugins.cma (plugin) (7,464 views)
- Disease - MeSH (7,412 views)
- Biouml.plugins.bionetgen (plugin) (7,377 views)
- Convert table via homology (analysis) (7,357 views)
- Create profile from gene table (analysis) (7,357 views)
- Join several tables (analysis) (7,349 views)
- Filter track by condition (analysis) (7,338 views)
- GO installation (7,331 views)
- Biouml.workbench (plugin) (7,317 views)
- Gene overlap statistics (analysis) (7,280 views)
- Heterozygous site caller (analysis) (7,254 views)
- SED-ML file (7,252 views)
- Create Match model (analysis) (7,209 views)
- Join table (analysis) (7,183 views)
- Generic file (7,154 views)
- Nonlinear Model (analysis) (7,138 views)
- Ru.biosoft.table (plugin) (7,097 views)
- Diagram view part (extension point) (7,064 views)
- Create weight matrix model (analysis) (7,009 views)
- VCF format (6,962 views)
- SDE model (analysis) (6,919 views)
- Biouml.plugins.bindingregions (plugin) (6,890 views)
- Steady State (analysis) (6,879 views)
- Gene expression prediction (6,872 views)
- HumanSim (6,817 views)
- Merge track statistics (analysis) (6,807 views)
- Biouml.plugins.bkl (plugin) (6,799 views)
- SAM or BAM alignment file (6,784 views)
- Orthogonal layout (6,751 views)
- Biouml.plugins.cellml (plugin) (6,730 views)
- Matching BioHub (6,712 views)
- Fastq format (6,710 views)
- SNP matching (analysis) (6,583 views)
- Save hits (analysis) (6,581 views)
- Biouml.plugins.chipmunk (plugin) (6,548 views)
- Venn diagrams (analysis) (6,516 views)
- IPS motif discovery (analysis) (6,506 views)
- Site distribution (analysis) (6,498 views)
- Illumina normalization (analysis) (6,471 views)
- Genes - GenBank (6,459 views)
- 1-dimensional arterial tree model (6,448 views)
- Ru.biosoft.galaxy (plugin) (6,438 views)
- Modular model of the human CVS v.2 (6,419 views)
- Mutation effect (analysis) (6,408 views)
- Ru.biosoft.server (plugin) (6,394 views)
- Analyze promoters (TRANSFAC(R)) (workflow) (6,304 views)
- Biouml.plugins.pass (plugin) (6,271 views)
- Image (element type) (6,251 views)
- Ru.biosoft.workbench (plugin) (6,218 views)
- Script viewpart (6,218 views)
- Biouml.plugins.creasemarks (plugin) (6,213 views)
- Fold-Change calculation (analysis) (6,194 views)
- Biouml.plugins.das (plugin) (6,167 views)
- CloudBioLinux (6,144 views)
- Run MACS 1.3.7 on ChiP-Seq (analysis) (6,140 views)
- Genes - Ensembl (6,130 views)
- Save network (analysis) (6,119 views)
- JVODE (6,113 views)
- SDF file (6,103 views)
- Join diagrams (analysis) (6,097 views)
- Biouml.plugins.enrichment (plugin) (6,081 views)
- Upload from FTP (analysis) (6,074 views)
- Method (extension point) (6,060 views)
- Collaborative diagram editing (6,008 views)
- Biouml.plugins.endonet (plugin) (5,964 views)
- Biouml.plugins.fbc (plugin) (5,950 views)
- Biouml.plugins.transfac (plugin) (5,922 views)
- Proteins - IPI (5,864 views)
- Biouml.plugins.sbml (plugin) (5,863 views)
- Genes - Entrez (5,855 views)
- TRANSFAC matrices format (5,855 views)
- Biouml.plugins.modelreduction (plugin) (5,851 views)
- SISSRs output (file format) (5,815 views)
- Biouml.plugins.reactome (plugin) (5,812 views)
- Track statistics (analysis) (5,804 views)
- Host object (extension point) (5,790 views)
- Biouml.plugins.go (plugin) (5,789 views)
- Map to Transpath (analysis) (5,787 views)
- Track coverage (analysis) (5,721 views)
- GinSim (file format) (5,709 views)
- Ru.biosoft.graph (plugin) (5,702 views)
- Biouml.plugins.bowtie (plugin) (5,656 views)
- to user communication (5,619 views)
- Pindel output (file format) (5,596 views)
- Ru.biosoft.plugins.jri (plugin) (5,592 views)
- Fastq mcf (5,541 views)
- Binding regions summary (analysis) (5,520 views)
- General control panel (5,517 views)
- CellML (file format) (5,514 views)
- Export (extension point) (5,492 views)
- Proteins - UniProt (5,485 views)
- Ru.biosoft.analysis.optimization (plugin) (5,458 views)
- Tabular (file format) (5,443 views)
- Biouml.plugins.keynodes (plugin) (5,404 views)
- Biouml.plugins.chemoinformatics (plugin) (5,391 views)
- Biouml.plugins.obo (plugin) (5,344 views)
- Stoichiometric Matrix (analysis) (5,344 views)
- Site search on gene set (analysis) (5,331 views)
- Tools Comparison (5,325 views)
- Visualize results (analysis) (5,323 views)
- Create matrix by mixture of normal components (analysis) (5,320 views)
- Biouml.plugins.sbw (plugin) (5,275 views)
- Biouml.plugins.optimization (plugin) (5,273 views)
- ChIP-Seq characteristics distribution (analysis) (5,246 views)
- Run MACS 1.4.0 on ChiP-Seq (analysis) (5,227 views)
- Reference type (5,220 views)
- Parameter identifiability example (5,217 views)
- Site counts in repeats (analysis) (5,201 views)
- Biouml.plugins.transpath (plugin) (5,191 views)
- Databases installation (5,189 views)
- Euler (5,184 views)
- Document pane (5,182 views)
- Site search result optimization (analysis) (5,127 views)
- SBML(CellDesigner) (file format) (5,123 views)
- Biouml.plugins.sedml (plugin) (5,121 views)
- Genome browser (5,109 views)
- Common class (extension point) (5,108 views)
