Site search on track (analysis)

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Analysis title
BSA-Site-search-on-track-icon.png Site search on track
Provider
Institute of Systems Biology
Class
SiteSearchAnalysis
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

Description

Predict transcription factor binding sites

Parameters:

  • Track – Filtering track
  • Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
  • Sequences collection – Collection of sequences
  • Profile – Predefined set of site models
  • Output name – Output name
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