Filter track by condition (analysis)

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Analysis title
BSA-Filter-track-by-condition-icon.png Filter track by condition
Provider
Institute of Systems Biology
Class
FilterTrackByCondition
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

Description

This analysis leaves only those sites which satisfy a given JavaScript condition. Each site from the track is tested against the condition.

  • Input track – track you want to filter
  • Condition – JavaScript expression which must return true if condition passed or false otherwise. The following variables are available:
    • seq – sequence or chromosome name,
    • from – site start position,
    • to – site end position,
    • length – site length,
    • strand – site strand (0 = unknown, 1 = n/a, 2 = +, 3 = −, 4 = both),
    • type – site type,
    • properties – additional track-specific properties
  • Output track – specify the path where to store the result
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