Convert table to track (analysis)

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Analysis title
BSA-Convert-table-to-track-icon.png Convert table to track
Provider
Institute of Systems Biology
Class
TableToTrack
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

Description

This analysis converts a table to a track

Parameters:

  • Input table – Table to convert to the track
  • Chromosome (sequence) column – Column where chromosome number is located (either like 'chr1', 'chr:1', 'chr.1' or simply '1')
  • From column – Column where site start coordinate is located
  • To column – Column where site end coordinate is located
  • Strand column – Column where site strand is located (+ or -)
  • Sequence collection – Sequences to bind the track to
  • Genome ID string – Something like 'hg18' or 'mm6'
  • Output track – Path where to store the result
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