Pages with the most categories
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- AUC Estimation For meta-cluster track (analysis) (4 categories)
- Compute coverage profile (analysis) (4 categories)
- Track coverage (analysis) (4 categories)
- Analysis of Cis-Regulatory Modules (analysis) (4 categories)
- Treatment Simulation (analysis) (4 categories)
- Copy data element (analysis) (4 categories)
- Creasemarks analysis (4 categories)
- Create matrix by mixture of normal components (analysis) (4 categories)
- Create random track (analysis) (4 categories)
- ROC-curves in clusterized peaks (analysis) (4 categories)
- Infer network (analysis) (4 categories)
- RiboseqArticleResult (analysis) (4 categories)
- Intersect tables (analysis) (4 categories)
- Export master track (analysis) (4 categories)
- LS-regression analysis (4 categories)
- Univariate samples analysis (4 categories)
- Visualize results (analysis) (4 categories)
- Filtration of predicted sites by filters (analysis) (4 categories)
- Mappability histogram (analysis) (4 categories)
- Blast alignment coverage (analysis) (4 categories)
- Sample population (analysis) (4 categories)
- Find unmappable regions (analysis) (4 categories)
- Search binding sites (analysis) (4 categories)
- Merge binding regions for cell-lines (analysis) (4 categories)
- Calculate weighted mutation score (analysis) (4 categories)
- Mixture of normal components (analysis) (4 categories)
- Chromosome enrichment (analysis) (4 categories)
- Sites genome location for folders (analysis) (4 categories)
- Normalize Illumina experiment and control (analysis) (4 categories)
- Generate dynamic model (analysis) (4 categories)
- Colon cancer signature (analysis) (4 categories)
- Particle swarm optimization (analysis) (4 categories)
- Plot scatter chart (analysis) (4 categories)
- Prepare Search by regulation (analysis) (4 categories)
- Copy folder (analysis) (4 categories)
- BAM filter multi-hits (analysis) (4 categories)
- Profiles Statistics (analysis) (4 categories)
- Create DAS track (analysis) (4 categories)
- Genome coverage (analysis) (4 categories)
- Create matrix logo (analysis) (4 categories)
- Create state (analysis) (4 categories)
- ROC-curves in grouped peaks (analysis) (4 categories)
- IPS prediction (analysis) (4 categories)
- Data matrix operations (analysis) (4 categories)
- Regression analysis (4 categories)
- Report generator for quality control analysis (4 categories)
- Encode quality metrics estimation (analysis) (4 categories)
- Intersect tracks (analysis) (4 categories)
- Join table (analysis) (4 categories)
- Export metadata json (analysis) (4 categories)
- Large sequence minimal unique length (analysis) (4 categories)
- Verify Condition for Table (analysis) (4 categories)
- MEALR (tracks) (analysis) (4 categories)
- Save hits (analysis) (4 categories)
- FinderArticlePoints (analysis) (4 categories)
- Search for enriched TFBSs (genes) (analysis) (4 categories)
- Merge peak callers (analysis) (4 categories)
- Set initial values from simulation result (analysis) (4 categories)
- ChIP-Seq characteristics distribution (analysis) (4 categories)
- Site Profile Filtering (analysis) (4 categories)
- Gene features (analysis) (4 categories)
- Cis-module identification (analysis) (4 categories)
- Oligonucleotides in sequence samples (analysis) (4 categories)
- Generate workflow from annotation diagram (analysis) (4 categories)
- Stem loop predictor (analysis) (4 categories)
- PASS analysis (4 categories)
- Color space to nucleotide (analysis) (4 categories)
- Compare analysis results (analysis) (4 categories)
- Adaptive simulated annealing (analysis) (4 categories)
- Prepare cluster to exp table (analysis) (4 categories)
- Analyze miRNA target enrichment (analysis) (4 categories)
- Correlation Analysis (4 categories)
- BAM filter strand specific (analysis) (4 categories)
- Create tissue-specific promoter track (analysis) (4 categories)
- ROC-curves in overlapped ChIP-Seq peaks (analysis) (4 categories)
- Diagram to user hub collection (analysis) (4 categories)
- Regression analysis advanced (analysis) (4 categories)
- Double encode SOLiD (analysis) (4 categories)
- Install ExPASy (analysis) (4 categories)
- Enhance Score (analysis) (4 categories)
- Export per cell clusters (analysis) (4 categories)
- Up and Down Identification (analysis) (4 categories)
- Limma (analysis) (4 categories)
- Save network (analysis) (4 categories)
- CRISPR Cas9 and specific oligonucleotides (analysis) (4 categories)
- Search for enriched TFBSs (tracks) (analysis) (4 categories)
- Merge peaks (analysis) (4 categories)
- SelectionTrustClusters (analysis) (4 categories)
- GTRD analysis (4 categories)
- Cellular genetic algorithm (analysis) (4 categories)
- Gathering genome statistics (analysis) (4 categories)
- ChIP-Seq peaks clusterization (analysis) (4 categories)
- Site Size Filtering (analysis) (4 categories)
- Multivariate regression analysis (4 categories)
- Gene overlap statistics (analysis) (4 categories)
- Change diagram (analysis) (4 categories)
- Non-merged ChIP-Seq tracks summary (analysis) (4 categories)
- Cis-module sets near given genes (analysis) (4 categories)
- Open per TF view (analysis) (4 categories)
- Cluster analysis (4 categories)
- PCA (analysis) (4 categories)
- Compare site models (analysis) (4 categories)
- Add calculated column (analysis) (4 categories)
- Polynomial Regression analysis (4 categories)
- Prepare finished tables (analysis) (4 categories)
- Correlations of best sites (analysis) (4 categories)
- Create per TF flat files (analysis) (4 categories)
- Create transcript region track (analysis) (4 categories)
- DNase-seq Group and Profile Generation (Previous version) (analysis) (4 categories)
- ROC curves for best sites union (analysis) (4 categories)
- Identical best site ROC-curves (analysis) (4 categories)
- Rebuild search indexes (analysis) (4 categories)
- Regulator search (analysis) (4 categories)
- Download model (analysis) (4 categories)
- Install HumanPSD(TM) database (analysis) (4 categories)
- Isoform TE (analysis) (4 categories)
- Estimate read density (analysis) (4 categories)
- Extend network (analysis) (4 categories)
- Update master track (analysis) (4 categories)
- LincRNA and mRNA features (analysis) (4 categories)
- SDE model (analysis) (4 categories)
- Find longest connected chains (analysis) (4 categories)
- Find miRNA feed forward loops with CMA (analysis) (4 categories)
- Merge simulation results (analysis) (4 categories)
- GTRD analysis advanced (analysis) (4 categories)
- ChIP-seq Quality control analysis (4 categories)
- Site counts in repeats (analysis) (4 categories)
- Multivariate sample analysis (4 categories)
- Nonlinear Model (analysis) (4 categories)
- Cistrom construction (analysis) (4 categories)
- Open regulated genes table (analysis) (4 categories)
- Add expression values (analysis) (4 categories)
- Pharmaceutical Compounds analysis (4 categories)
- Population generation (analysis) (4 categories)
- Transcript structure analysis (4 categories)
- Prepare target genes by expression (analysis) (4 categories)
- Convert diagram to Transpath (analysis) (4 categories)
- Apply events (analysis) (4 categories)
- Count olig frequencies (analysis) (4 categories)
- Create custom project (analysis) (4 categories)
- Quadratic Hill-climbing (analysis) (4 categories)
- Heatmap (analysis) (4 categories)
- Quantile normalization (analysis) (4 categories)
- Hypergeometric analysis (4 categories)
- DNase-seq Group and Profile Generation (analysis) (4 categories)
- Identification of cis-regulatory modules with given pattern of TF-classes (analysis) (4 categories)
- Remote application client (analysis) (4 categories)
- Import HOCOMOCO (analysis) (4 categories)
- Install Reactome (analysis) (4 categories)
- Evolution strategy (SRES) (analysis) (4 categories)
- Extract RNA length (analysis) (4 categories)
- Two multivariate sample analysis (4 categories)
- Update pubmed (analysis) (4 categories)
- Biouml.plugins.sabiork (plugin) (3 categories)
- Find common effectors for multiple gene sets (TRANSPATH(R)) (workflow) (3 categories)
- Biouml.plugins.simulation (plugin) (3 categories)
- SDF file (3 categories)
- Mapping to ontologies (TRANSPATH(R)) (workflow) (3 categories)
- Find master regulators for multiple gene sets (GeneWays) (workflow) (3 categories)
- Biouml.plugins.users (plugin) (3 categories)
- Mapping to ontology - select a classification (Multiple Gene tables) (workflow) (3 categories)
- Focused upstream analysis (TRANSFAC(R) and TRANSPATH(R)) (workflow) (3 categories)
- ChIP-Seq - Identify TF binding sites on peaks for multiple datasets (TRANSFAC(R)) (workflow) (3 categories)
- Gene set enrichment analysis (Agilent probes) (workflow) (3 categories)
- Com.developmentontheedge.util (plugin) (3 categories)
- Compute differentially expressed genes using EBarrays (workflow) (3 categories)
- Analyze any DNA sequence, GeneBank (workflow) (3 categories)
- Biouml.plugins.agentmodeling (plugin) (3 categories)
- Hypergeometric analysis for multiple inputs (workflow) (3 categories)
- Biouml.plugins.ccsignature (plugin) (3 categories)
- Biouml.plugins.das (plugin) (3 categories)
- Identify enriched motifs in tracks (TRANSFAC(R)) (workflow) (3 categories)
- Biouml.plugins.fbc (plugin) (3 categories)
- Biouml.plugins.go (plugin) (3 categories)
- Biouml.plugins.keynodes (plugin) (3 categories)
- Ru.biosoft.bsa.server (plugin) (3 categories)
- Explain my genes (workflow) (3 categories)
- Biouml.plugins.mirprom (plugin) (3 categories)
- Ru.biosoft.math (plugin) (3 categories)
- Biouml.plugins.pharm (plugin) (3 categories)
- Ru.biosoft.services (plugin) (3 categories)
- Biouml.plugins.proteinmodel (plugin) (3 categories)
- Ru.biosoft.table (plugin) (3 categories)
- Biouml.plugins.sbgn (plugin) (3 categories)
- Find common effectors in networks (GeneWays) (workflow) (3 categories)
- Biouml.plugins.softberry (plugin) (3 categories)
- Mapping to ontologies and comparison for two gene sets (HumanPSD(TM)) (workflow) (3 categories)
- Find master regulators for multiple gene sets (TRANSPATH(R)) (workflow) (3 categories)
- Biouml.plugins.wiki (plugin) (3 categories)
- ChIP-Seq - Identify and classify target genes (HumanPSD(TM)) (workflow) (3 categories)
- Gene set enrichment analysis (Gene table) (workflow) (3 categories)
- Peaks to matrices (workflow) (3 categories)
- Compute differentially expressed genes using Hypergeometric test (Affymetrix probes) (workflow) (3 categories)
- Analyze any DNA sequence (GTRD) (workflow) (3 categories)
- Cross-species identification of enriched motifs in promoters, using orthologue information (TRANSFAC(R)) (workflow) (3 categories)
- Biouml.plugins.agilent (plugin) (3 categories)
- Biouml.plugins.cellml (plugin) (3 categories)
- Identify composite modules in promoters (TRANSFAC(R)) (workflow) (3 categories)
- Biouml.plugins.download (plugin) (3 categories)
- Biouml.plugins.genemodels (plugin) (3 categories)
- Biouml.plugins.googledrive (plugin) (3 categories)
- Biouml.plugins.lucene (plugin) (3 categories)
- Ru.biosoft.bsa (plugin) (3 categories)
- Biouml.plugins.modelreduction (plugin) (3 categories)
- Ru.biosoft.plugins.graph (plugin) (3 categories)
- Upstream analysis (TRANSFAC(R) and GeneWays) (workflow) (3 categories)
- Biouml.plugins.psimi (plugin) (3 categories)
- Ru.biosoft.templates (plugin) (3 categories)
- Biouml.plugins.sbml (plugin) (3 categories)
- Find common effectors in networks (TRANSPATH(R)) (workflow) (3 categories)
- Biouml.plugins.stochastic (plugin) (3 categories)
- Mapping to ontologies and comparison for two gene sets (TRANSPATH(R)) (workflow) (3 categories)
- Find master regulators in mutated network (TRANSPATH(R)) (workflow) (3 categories)
- Biouml.workbench.graph (plugin) (3 categories)
- SRA to FASTQ (workflow) (3 categories)
- ChIP-Seq - Identify and classify target genes (TRANSPATH(R)) (workflow) (3 categories)
- Gene set enrichment analysis (Illumina probes) (workflow) (3 categories)
- Compute differentially expressed genes using Hypergeometric test (Agilent probes) (workflow) (3 categories)
- Prediction of miRNA binding sites (workflow) (3 categories)
- Analyze any DNA sequence (TRANSFAC(R)) (workflow) (3 categories)
- Quantification of RNA-seq in BAM format for mouse mm9 single end (workflow) (3 categories)
- Cross-species mapping to ontologies, using orthologue information (HumanPSD(TM)) (workflow) (3 categories)
- Biouml.plugins.antimony (plugin) (3 categories)
- Biouml.plugins.chebi (plugin) (3 categories)
- Identify enriched composite modules in promoters (GTRD) (workflow) (3 categories)
- Biouml.plugins.dropbox (plugin) (3 categories)
- Biouml.plugins.genenet (plugin) (3 categories)
- Biouml.plugins.graphml (plugin) (3 categories)
- Biouml.plugins.machinelearning (plugin) (3 categories)
- Ru.biosoft.exception (plugin) (3 categories)
- Biouml.plugins.node (plugin) (3 categories)
- Ru.biosoft.plugins.javascript (plugin) (3 categories)
- Upstream analysis (TRANSFAC(R) and TRANSPATH(R)) (workflow) (3 categories)
- Biouml.plugins.reactome.biohub (plugin) (3 categories)
- Ru.biosoft.treetable (plugin) (3 categories)
- Biouml.plugins.sbw (plugin) (3 categories)
- Find enriched TF binding sites in variation sites (TRANSFAC(R)) (workflow) (3 categories)
- Biouml.plugins.svg (plugin) (3 categories)
- Mapping to ontologies for multiple gene sets (HumanPSD(TM)) (workflow) (3 categories)
- Find master regulators in mutated network (workflow) (3 categories)
- Biouml.workbench (plugin) (3 categories)
- ChIP-Seq - Identify and classify target genes (workflow) (3 categories)
- Gene set enrichment analysis - select a classification (Gene table) (workflow) (3 categories)
- Compute differentially expressed genes using Hypergeometric test (Illumina probes) (workflow) (3 categories)
- Analyze any DNA sequence for site enrichment (GTRD) (workflow) (3 categories)
- Convert identifiers for multiple gene sets (workflow) (3 categories)
- Quantification of RNA-seq in FASTQ format for mouse mm9 single end (workflow) (3 categories)
- Biouml.plugins.bindingregions (plugin) (3 categories)
- Biouml.plugins.chemoinformatics (plugin) (3 categories)
- Identify enriched composite modules in promoters (TRANSFAC(R)) (workflow) (3 categories)
