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251. (hist) ‎Plot2D (analysis) ‎[555 bytes]
252. (hist) ‎Sort SQL track (analysis) ‎[555 bytes]
253. (hist) ‎Identify composite modules in promoters (TRANSFAC(R)) (workflow) ‎[556 bytes]
254. (hist) ‎Servers ‎[556 bytes]
255. (hist) ‎Color space to nucleotide (analysis) ‎[559 bytes]
256. (hist) ‎Probes - Affymetrix HG-U133+ PM ‎[559 bytes]
257. (hist) ‎Probes - Affymetrix miRNA-3-0 ‎[559 bytes]
258. (hist) ‎Probes - Affymetrix miRNA-2-0 ‎[559 bytes]
259. (hist) ‎Probes - Affymetrix miRNA-1-0 ‎[559 bytes]
260. (hist) ‎Report (analysis) ‎[562 bytes]
261. (hist) ‎Probes - Affymetrix HTA-2-0 ‎[565 bytes]
262. (hist) ‎Stub process file (analysis) ‎[565 bytes]
263. (hist) ‎Sbml (host object) ‎[569 bytes]
264. (hist) ‎Create flat files (analysis) ‎[570 bytes]
265. (hist) ‎Run analysis ‎[573 bytes]
266. (hist) ‎Element type ‎[577 bytes]
267. (hist) ‎RiboseqArticleResult (analysis) ‎[581 bytes]
268. (hist) ‎Biouml.plugins.expasy (plugin) ‎[583 bytes]
269. (hist) ‎Recon transformer (analysis) ‎[585 bytes]
270. (hist) ‎Check quotas (analysis) ‎[589 bytes]
271. (hist) ‎Peaks to matrices (workflow) ‎[593 bytes]
272. (hist) ‎Search for self-regulating transcription factors (TRANSFAC(R) and TRANSPATH(R)) (workflow) ‎[596 bytes]
273. (hist) ‎Cross-species mapping to ontologies, using orthologue information (HumanPSD(TM)) (workflow) ‎[600 bytes]
274. (hist) ‎Node (host object) ‎[601 bytes]
275. (hist) ‎BAM filter multi-hits (analysis) ‎[601 bytes]
276. (hist) ‎Viewpart ‎[604 bytes]
277. (hist) ‎Copy folder (analysis) ‎[605 bytes]
278. (hist) ‎TRANSFAC profile (file format) ‎[605 bytes]
279. (hist) ‎Join GTRD Tracks (analysis) ‎[605 bytes]
280. (hist) ‎Split fasta (analysis) ‎[608 bytes]
281. (hist) ‎Site Size Filtering (analysis) ‎[613 bytes]
282. (hist) ‎Compare Experiments (analysis) ‎[614 bytes]
283. (hist) ‎Import ensembl homology (analysis) ‎[614 bytes]
284. (hist) ‎SBGN-ML (file format) ‎[615 bytes]
285. (hist) ‎Fastx clip ‎[616 bytes]
286. (hist) ‎Coverage Profiles Cutoff (analysis) ‎[617 bytes]
287. (hist) ‎Systems biology - basic model editing ‎[618 bytes]
288. (hist) ‎Biouml.plugins.reactome (plugin) ‎[620 bytes]
289. (hist) ‎Substances - KEGG ‎[620 bytes]
290. (hist) ‎Model analysis ‎[621 bytes]
291. (hist) ‎Export metadata json (analysis) ‎[621 bytes]
292. (hist) ‎Share molecules (analysis) ‎[622 bytes]
293. (hist) ‎Document pane ‎[626 bytes]
294. (hist) ‎Track correlation (analysis) ‎[626 bytes]
295. (hist) ‎Rebuild search indexes (analysis) ‎[627 bytes]
296. (hist) ‎Merge simulation results (analysis) ‎[627 bytes]
297. (hist) ‎Double encode SOLiD (analysis) ‎[629 bytes]
298. (hist) ‎Blast alignment coverage (analysis) ‎[630 bytes]
299. (hist) ‎Prepare Search by regulation (analysis) ‎[632 bytes]
300. (hist) ‎Site Profile Filtering (analysis) ‎[635 bytes]
301. (hist) ‎Orthogonal layout ‎[636 bytes]
302. (hist) ‎Virtual physiological human ‎[636 bytes]
303. (hist) ‎Biouml.plugins.chebi (plugin) ‎[637 bytes]
304. (hist) ‎Check Workflow consistency (analysis) ‎[640 bytes]
305. (hist) ‎Select files from folder (analysis) ‎[642 bytes]
306. (hist) ‎Map to Transpath (analysis) ‎[644 bytes]
307. (hist) ‎Cross-species identification of enriched motifs in promoters, using orthologue information (TRANSFAC(R)) (workflow) ‎[646 bytes]
308. (hist) ‎GC island finder (analysis) ‎[648 bytes]
309. (hist) ‎Prepare cluster to exp table (analysis) ‎[658 bytes]
310. (hist) ‎Install HumanPSD(TM) database (analysis) ‎[659 bytes]
311. (hist) ‎Join tracks (analysis) ‎[662 bytes]
312. (hist) ‎Group table rows (analysis) ‎[664 bytes]
313. (hist) ‎Set initial values from simulation result (analysis) ‎[666 bytes]
314. (hist) ‎CMA Result Statistic (analysis) ‎[671 bytes]
315. (hist) ‎Install TRANSPATH(R) database (analysis) ‎[675 bytes]
316. (hist) ‎ChIP-Seq - Identify TF binding sites on peaks (TRANSFAC(R)) (workflow) ‎[675 bytes]
317. (hist) ‎Ru.biosoft.workbench (plugin) ‎[675 bytes]
318. (hist) ‎Illumina metylation probes to track (analysis) ‎[679 bytes]
319. (hist) ‎Biouml.plugins.bkl (plugin) ‎[682 bytes]
320. (hist) ‎Select random rows (analysis) ‎[682 bytes]
321. (hist) ‎Proteins - Reactome ‎[684 bytes]
322. (hist) ‎Select table columns (analysis) ‎[685 bytes]
323. (hist) ‎Colon cancer signature2 (analysis) ‎[686 bytes]
324. (hist) ‎ChIP-Seq - Identify and classify target genes (HumanPSD(TM)) (workflow) ‎[689 bytes]
325. (hist) ‎DataFilter (host object) ‎[690 bytes]
326. (hist) ‎Merge peak callers (analysis) ‎[690 bytes]
327. (hist) ‎Image (element type) ‎[691 bytes]
328. (hist) ‎Biouml.plugins.endonet (plugin) ‎[692 bytes]
329. (hist) ‎Substances - CAS ‎[693 bytes]
330. (hist) ‎Export master track (analysis) ‎[695 bytes]
331. (hist) ‎Transform table (analysis) ‎[696 bytes]
332. (hist) ‎Ru.biosoft.table (plugin) ‎[698 bytes]
333. (hist) ‎Query system (extension point) ‎[698 bytes]
334. (hist) ‎Enhance Score (analysis) ‎[702 bytes]
335. (hist) ‎Script viewpart ‎[703 bytes]
336. (hist) ‎Simulate Population (analysis) ‎[704 bytes]
337. (hist) ‎Table imputation (analysis) ‎[705 bytes]
338. (hist) ‎Install Reactome (analysis) ‎[706 bytes]
339. (hist) ‎Biouml.plugins.sbml (plugin) ‎[707 bytes]
340. (hist) ‎ChIP-Seq - Identify and classify target genes (TRANSPATH(R)) (workflow) ‎[708 bytes]
341. (hist) ‎Identify enriched motifs in tracks (TRANSFAC(R)) (workflow) ‎[709 bytes]
342. (hist) ‎Genome coverage (analysis) ‎[712 bytes]
343. (hist) ‎ChIP-Seq - Identify TF binding sites on peaks for multiple datasets (TRANSFAC(R)) (workflow) ‎[712 bytes]
344. (hist) ‎Long-term model of the CVS/Renal system ‎[716 bytes]
345. (hist) ‎Biouml.plugins.transfac (plugin) ‎[716 bytes]
346. (hist) ‎Get miRNA targets (analysis) ‎[716 bytes]
347. (hist) ‎Reads to matrices (workflow) ‎[717 bytes]
348. (hist) ‎Proteins - GenBank ‎[722 bytes]
349. (hist) ‎Profile (element type) ‎[724 bytes]
350. (hist) ‎Export element (analysis) ‎[725 bytes]
351. (hist) ‎Ru.biosoft.plugins.javascript (plugin) ‎[726 bytes]
352. (hist) ‎BioCloudCentral ‎[727 bytes]
353. (hist) ‎SEEK Synchronize (analysis) ‎[727 bytes]
354. (hist) ‎Substances - ChEBI ‎[730 bytes]
355. (hist) ‎SVM (analysis) ‎[730 bytes]
356. (hist) ‎Biouml.plugins.fbc (plugin) ‎[731 bytes]
357. (hist) ‎Solver (extension point) ‎[731 bytes]
358. (hist) ‎Make meta tracks (analysis) ‎[732 bytes]
359. (hist) ‎Sign test (analysis) ‎[733 bytes]
360. (hist) ‎Mappability histogram (analysis) ‎[735 bytes]
361. (hist) ‎Open regulated genes table (analysis) ‎[735 bytes]
362. (hist) ‎Sequence minimal unique length (analysis) ‎[737 bytes]
363. (hist) ‎Merge track statistics (analysis) ‎[738 bytes]
364. (hist) ‎Apply state to diagram (analysis) ‎[738 bytes]
365. (hist) ‎Run a Workflow as Analysis ‎[738 bytes]
366. (hist) ‎Hemodynamics model (file format) ‎[740 bytes]
367. (hist) ‎Fast table filter (analysis) ‎[741 bytes]
368. (hist) ‎Super annotate table (analysis) ‎[746 bytes]
369. (hist) ‎Flux Balance Analysis (workflow) ‎[747 bytes]
370. (hist) ‎ArticleTrackCreator (analysis) ‎[750 bytes]
371. (hist) ‎Tree-table document ‎[752 bytes]
372. (hist) ‎Open tracks for all TF (analysis) ‎[753 bytes]
373. (hist) ‎Create profile from CMA model (analysis) ‎[754 bytes]
374. (hist) ‎DNase-seq Group and Profile Generation (analysis) ‎[756 bytes]
375. (hist) ‎Annotate diagram (analysis) ‎[757 bytes]
376. (hist) ‎Genes - GenBank ‎[759 bytes]
377. (hist) ‎Bioumlsim ‎[760 bytes]
378. (hist) ‎Site distribution (analysis) ‎[762 bytes]
379. (hist) ‎Convert table via homology (analysis) ‎[762 bytes]
380. (hist) ‎DNase-seq Group and Profile Generation (Previous version) (analysis) ‎[762 bytes]
381. (hist) ‎Biouml.plugins.illumina (plugin) ‎[768 bytes]
382. (hist) ‎SelectionTrustClusters (analysis) ‎[771 bytes]
383. (hist) ‎Join GTRD clusters (analysis) ‎[774 bytes]
384. (hist) ‎Acknowledgements ‎[775 bytes]
385. (hist) ‎BioUML format ‎[776 bytes]
386. (hist) ‎Diagram to user hub collection (analysis) ‎[778 bytes]
387. (hist) ‎ChIP-Seq - Identify composite modules on peaks (TRANSFAC(R)) (workflow) ‎[779 bytes]
388. (hist) ‎RiboSeqExp (analysis) ‎[780 bytes]
389. (hist) ‎Map Transfac sites to genome (analysis) ‎[781 bytes]
390. (hist) ‎Compute coverage profile (analysis) ‎[781 bytes]
391. (hist) ‎CoverageCheker (analysis) ‎[782 bytes]
392. (hist) ‎Convert diagram to pairs (analysis) ‎[785 bytes]
393. (hist) ‎Create custom project (analysis) ‎[787 bytes]
394. (hist) ‎Apply CMA model to tracks (analysis) ‎[790 bytes]
395. (hist) ‎Calculate TFs regulatory score (analysis) ‎[790 bytes]
396. (hist) ‎Proteins - RefSeq ‎[795 bytes]
397. (hist) ‎Large sequence minimal unique length (analysis) ‎[795 bytes]
398. (hist) ‎Create miRNA promoters (analysis) ‎[795 bytes]
399. (hist) ‎Project ‎[796 bytes]
400. (hist) ‎Verify Condition for Table (analysis) ‎[799 bytes]
401. (hist) ‎SED-ML file ‎[800 bytes]
402. (hist) ‎Read counter (analysis) ‎[801 bytes]
403. (hist) ‎Plot pie chart (analysis) ‎[801 bytes]
404. (hist) ‎Hierarchical layout ‎[804 bytes]
405. (hist) ‎Remove unobservable molecules (analysis) ‎[804 bytes]
406. (hist) ‎Get transcripts track (analysis) ‎[804 bytes]
407. (hist) ‎Identify enriched motifs in tissue specific promoters (TRANSFAC(R)) (workflow) ‎[804 bytes]
408. (hist) ‎Construct IPS CisModule (analysis) ‎[805 bytes]
409. (hist) ‎Heterozygous site caller (analysis) ‎[805 bytes]
410. (hist) ‎Convert tracks to VCF (analysis) ‎[806 bytes]
411. (hist) ‎Probes - Affymetrix ST ‎[807 bytes]
412. (hist) ‎Identify enriched motifs in tissue specific tracks (TRANSFAC(R)) (workflow) ‎[807 bytes]
413. (hist) ‎Create IPS model (analysis) ‎[808 bytes]
414. (hist) ‎Repository pane toolbar ‎[810 bytes]
415. (hist) ‎Gene features (analysis) ‎[811 bytes]
416. (hist) ‎Transcripts - RefSeq ‎[813 bytes]
417. (hist) ‎Two multivariate sample analysis ‎[813 bytes]
418. (hist) ‎Plot scatter chart (analysis) ‎[815 bytes]
419. (hist) ‎Generate dynamic model (analysis) ‎[816 bytes]
420. (hist) ‎Gene overlap statistics (analysis) ‎[817 bytes]
421. (hist) ‎Merge peaks (analysis) ‎[817 bytes]
422. (hist) ‎CR cluster selector (analysis) ‎[818 bytes]
423. (hist) ‎Compute profile thresholds (analysis) ‎[819 bytes]
424. (hist) ‎Site search summary (analysis) ‎[820 bytes]
425. (hist) ‎Extend network (analysis) ‎[820 bytes]
426. (hist) ‎Genes - Ensembl ‎[820 bytes]
427. (hist) ‎Proteins - IPI ‎[824 bytes]
428. (hist) ‎Substances - DrugBank ‎[825 bytes]
429. (hist) ‎Biouml.plugins.chipmunk (plugin) ‎[826 bytes]
430. (hist) ‎Extract RNA length (analysis) ‎[826 bytes]
431. (hist) ‎Change profile cutoffs (analysis) ‎[827 bytes]
432. (hist) ‎Filter duplicate rows (analysis) ‎[829 bytes]
433. (hist) ‎FinderArticlePoints (analysis) ‎[829 bytes]
434. (hist) ‎Genes - Entrez ‎[835 bytes]
435. (hist) ‎Proteins - Ensembl ‎[838 bytes]
436. (hist) ‎Reactions Analysis ‎[839 bytes]
437. (hist) ‎Find target genes (analysis) ‎[839 bytes]
438. (hist) ‎ArticleComparator (analysis) ‎[841 bytes]
439. (hist) ‎Site search on track (analysis) ‎[843 bytes]
440. (hist) ‎Probes - Affymetrix ‎[843 bytes]
441. (hist) ‎Systems biology - model layout ‎[843 bytes]
442. (hist) ‎ChIP-seq peak profile (analysis) ‎[846 bytes]
443. (hist) ‎Variance filter (analysis) ‎[847 bytes]
444. (hist) ‎Find unmappable regions (analysis) ‎[848 bytes]
445. (hist) ‎Galaxy cloud ‎[850 bytes]
446. (hist) ‎Upload from FTP (analysis) ‎[851 bytes]
447. (hist) ‎Grid layout ‎[855 bytes]
448. (hist) ‎Transcripts - Ensembl ‎[856 bytes]
449. (hist) ‎SDE model (analysis) ‎[857 bytes]
450. (hist) ‎Normalize (host object) ‎[857 bytes]
451. (hist) ‎Differential expression with DESeq (analysis) ‎[857 bytes]
452. (hist) ‎Merge table columns (analysis) ‎[859 bytes]
453. (hist) ‎Join diagrams (analysis) ‎[866 bytes]
454. (hist) ‎Biouml.plugins.sedml (plugin) ‎[866 bytes]
455. (hist) ‎Prepare GTF annotation (analysis) ‎[866 bytes]
456. (hist) ‎Create profile from gene table (analysis) ‎[867 bytes]
457. (hist) ‎Simulation analysis ‎[870 bytes]
458. (hist) ‎Motif quality analysis ‎[874 bytes]
459. (hist) ‎ChIP-Seq characteristics distribution (analysis) ‎[874 bytes]
460. (hist) ‎Chipmunk (host object) ‎[876 bytes]
461. (hist) ‎Proteins - UniProt ‎[879 bytes]
462. (hist) ‎Convert diagram to Transpath (analysis) ‎[881 bytes]
463. (hist) ‎Transcript structure analysis ‎[882 bytes]
464. (hist) ‎ZIP-archive (file format) ‎[887 bytes]
465. (hist) ‎1-dimensional arterial tree model ‎[888 bytes]
466. (hist) ‎LS-regression analysis ‎[888 bytes]
467. (hist) ‎Application log (viewpart) ‎[890 bytes]
468. (hist) ‎Diff manager (extension point) ‎[890 bytes]
469. (hist) ‎Extract ribosomal RNA (analysis) ‎[891 bytes]
470. (hist) ‎Cis-module identification (analysis) ‎[894 bytes]
471. (hist) ‎Biouml.plugins.optimization (plugin) ‎[896 bytes]
472. (hist) ‎Creasemarks analysis ‎[897 bytes]
473. (hist) ‎Analyses (extension point) ‎[897 bytes]
474. (hist) ‎Import from TranSMART (analysis) ‎[900 bytes]
475. (hist) ‎Site search report (analysis) ‎[901 bytes]
476. (hist) ‎Import from BC Platform (analysis) ‎[903 bytes]
477. (hist) ‎Biouml.plugins.enrichment (plugin) ‎[905 bytes]
478. (hist) ‎Count olig frequencies (analysis) ‎[906 bytes]
479. (hist) ‎Perfectosape (analysis) ‎[906 bytes]
480. (hist) ‎Match genes and metabolites (analysis) ‎[910 bytes]
481. (hist) ‎SISSRs output (file format) ‎[913 bytes]
482. (hist) ‎Biohub (host object) ‎[923 bytes]
483. (hist) ‎Clean up SQL database (analysis) ‎[923 bytes]
484. (hist) ‎Create weight matrix model (analysis) ‎[938 bytes]
485. (hist) ‎Multivariate sample analysis ‎[938 bytes]
486. (hist) ‎Disease - MeSH ‎[939 bytes]
487. (hist) ‎Create profile from site model table (analysis) ‎[939 bytes]
488. (hist) ‎Reduce track (analysis) ‎[942 bytes]
489. (hist) ‎Create Match model (analysis) ‎[946 bytes]
490. (hist) ‎Annotate track with genes (analysis) ‎[950 bytes]
491. (hist) ‎Gene set to track (analysis) ‎[950 bytes]
492. (hist) ‎Service (extension point) ‎[951 bytes]
493. (hist) ‎Virtual collection (extension point) ‎[952 bytes]
494. (hist) ‎Oligonucleotides in sequence samples (analysis) ‎[952 bytes]
495. (hist) ‎Compare site models (analysis) ‎[953 bytes]
496. (hist) ‎Short term model of the heart output regulation ‎[962 bytes]
497. (hist) ‎Systems biology - Get started ‎[962 bytes]
498. (hist) ‎Save network (analysis) ‎[971 bytes]
499. (hist) ‎Transcript set to track (analysis) ‎[974 bytes]
500. (hist) ‎Find miRNA feed forward loops with CMA (analysis) ‎[976 bytes]

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