Large sequence minimal unique length (analysis)

From BioUML platform
Jump to: navigation, search
Analysis title
Default-analysis-icon.png Large sequence minimal unique length
Provider
Institute of Systems Biology
Class
LargeSequenceMinimalUniqueLength
Plugin
biouml.plugins.riboseq (RiboSeq Experiment)

Description

For each position in genome (or it's part) find the shortest possible read length that can map uniquely to this position. Support sequences larger then 1e9 nucleotides.

Parameters:

  • Genome – Collection of genomic sequences
  • Output wig file – Wig file with minimal unique length values
Personal tools
Namespaces

Variants
Actions
BioUML platform
Community
Modelling
Analysis & Workflows
Collaborative research
Development
Virtual biology
Wiki
Toolbox