User contributions
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- 11:32, 14 June 2013 (diff | hist) . . (+32) . . m Cross cost grid layout (+Category:Layout algorithms)
- 13:55, 13 June 2013 (diff | hist) . . (0) . . m Ensembl installation (commons-net-3.2.jar -> commons-net-3.3.jar)
- 18:05, 11 June 2013 (diff | hist) . . (+31) . . Databases installation (top)
- 18:05, 11 June 2013 (diff | hist) . . (-5) . . m GO installation (s/Ensembl/GO/)
- 18:05, 11 June 2013 (diff | hist) . . (+139) . . GO installation (+Lucene indexes info)
- 18:04, 11 June 2013 (diff | hist) . . (-3) . . Ensembl installation (→Notes)
- 18:04, 11 June 2013 (diff | hist) . . (+2,150) . . N Ensembl installation (Created page with "This page describes how to install Ensembl database and integrate it with BioUML server or BioUML workbench. The information described here is valid for BioUML 0.9.5 a...")
- 17:47, 11 June 2013 (diff | hist) . . (+27) . . Databases installation (+Ensembl installation)
- 17:39, 11 June 2013 (diff | hist) . . (0) . . Template:GeneXplain current version (top)
- 17:38, 11 June 2013 (diff | hist) . . (0) . . Template:BioUML current version
- 10:40, 10 June 2013 (diff | hist) . . (-10) . . m Repository pane (-{{Stub}})
- 10:39, 10 June 2013 (diff | hist) . . (-5) . . m Table document ({{Type link}} used)
- 17:41, 7 June 2013 (diff | hist) . . (+20) . . m Diagram document (Viewparts link corrected)
- 09:54, 7 June 2013 (diff | hist) . . (0) . . File:Insertin2dia icon.png (Lan@dote.ru uploaded a new version of "File:Insertin2dia icon.png") (top)
- 09:54, 7 June 2013 (diff | hist) . . (0) . . File:Recalculate doc icon.png (Lan@dote.ru uploaded a new version of "File:Recalculate doc icon.png") (top)
- 09:54, 7 June 2013 (diff | hist) . . (0) . . File:Recalculate doc icon.png (Lan@dote.ru uploaded a new version of "File:Recalculate doc icon.png")
- 09:52, 7 June 2013 (diff | hist) . . (-35) . . m BioUML user interface ("20px" removed - →Viewparts area)
- 09:50, 7 June 2013 (diff | hist) . . (0) . . File:View separately icon.png (Lan@dote.ru uploaded a new version of "File:View separately icon.png") (top)
- 09:50, 7 June 2013 (diff | hist) . . (0) . . File:Edit description icon.png (Lan@dote.ru uploaded a new version of "File:Edit description icon.png") (top)
- 09:49, 7 June 2013 (diff | hist) . . (0) . . File:Search icon.png (Lan@dote.ru uploaded a new version of "File:Search icon.png") (top)
- 09:49, 7 June 2013 (diff | hist) . . (0) . . File:Add element icon.png (Lan@dote.ru uploaded a new version of "File:Add element icon.png") (top)
- 09:49, 7 June 2013 (diff | hist) . . (0) . . File:Discard icon.png (Lan@dote.ru uploaded a new version of "File:Discard icon.png") (top)
- 09:49, 7 June 2013 (diff | hist) . . (0) . . File:Execute icon.png (Lan@dote.ru uploaded a new version of "File:Execute icon.png") (top)
- 09:48, 7 June 2013 (diff | hist) . . (0) . . File:Add2docpane icon.png (Lan@dote.ru uploaded a new version of "File:Add2docpane icon.png") (top)
- 09:48, 7 June 2013 (diff | hist) . . (0) . . File:Add2newdia icon.png (Lan@dote.ru uploaded a new version of "File:Add2newdia icon.png") (top)
- 09:47, 7 June 2013 (diff | hist) . . (0) . . File:Stop icon.png (Lan@dote.ru uploaded a new version of "File:Stop icon.png") (top)
- 09:47, 7 June 2013 (diff | hist) . . (0) . . File:Accept2viewparts icon.png (Lan@dote.ru uploaded a new version of "File:Accept2viewparts icon.png") (top)
- 09:46, 7 June 2013 (diff | hist) . . (0) . . File:Add2clipboard icon.png (Lan@dote.ru uploaded a new version of "File:Add2clipboard icon.png") (top)
- 09:42, 7 June 2013 (diff | hist) . . (+19) . . m Table document (Viewparts link - →Adjusting table structure)
- 17:45, 6 June 2013 (diff | hist) . . (+15) . . m Repository pane (Links - →Handling files)
- 17:40, 6 June 2013 (diff | hist) . . (+14) . . m Reference type (Link to table element) (top)
- 17:39, 6 June 2013 (diff | hist) . . (+1,859) . . N Table (element type) (Created page with "{{Element type|table|ru.biosoft.table.TableDataCollection}} === Description === Table element represents a two-dimensional table. You may view the table as a [[table document]...")
- 16:41, 6 June 2013 (diff | hist) . . (+600) . . N Document pane (Created page with "[[BioUML web edition interface. Document pane is marked as (B).]] [[BioUML workbench interface. D...")
- 16:40, 4 June 2013 (diff | hist) . . (+21) . . m Modular model of the human CVS v.2
- 16:33, 4 June 2013 (diff | hist) . . (+14) . . m Creating Galaxy tool (Type link|folder - →Customizing tools menu)
- 16:00, 4 June 2013 (diff | hist) . . (+31) . . BioUML wiki Bot (+Template:Reference types) (top)
- 15:58, 4 June 2013 (diff | hist) . . (+46) . . m Repository pane toolbar (+BioUML user interface)
- 15:57, 4 June 2013 (diff | hist) . . (+28) . . m Viewpart (+BioUML user interface) (top)
- 15:57, 4 June 2013 (diff | hist) . . (+46) . . m Repository pane (+BioUML user interface)
- 15:57, 4 June 2013 (diff | hist) . . (+46) . . m General control panel (+BioUML user interface) (top)
- 15:52, 4 June 2013 (diff | hist) . . (+67) . . BioUML wiki Bot (+new templates)
- 15:49, 4 June 2013 (diff | hist) . . (+144) . . Repository pane toolbar (+{{Web tree actions}})
- 15:47, 4 June 2013 (diff | hist) . . (+33) . . m Perspective (general control panel) (top)
- 15:46, 4 June 2013 (diff | hist) . . (+1,118) . . N General control panel (Created page with "[[BioUML web edition interface. General control panel is marked as (E).]] [[BioUML workbench inte...")
- 15:40, 4 June 2013 (diff | hist) . . (+4) . . m BioUML user interface (general control panel)
- 15:36, 4 June 2013 (diff | hist) . . (+124) . . BioUML user interface (+Tree & toolbar actions)
- 15:06, 4 June 2013 (diff | hist) . . (-19) . . Reference type
- 11:14, 4 June 2013 (diff | hist) . . (+17) . . m Simulation (Link fixed - →ODE Simulation Engine)
- 11:13, 4 June 2013 (diff | hist) . . (+17) . . m Simulation (Link fixed - →Agent-based Simualtion Engine)
- 11:00, 4 June 2013 (diff | hist) . . (+281) . . m BioUML development history (Links - →2010)
- 10:56, 4 June 2013 (diff | hist) . . (+3) . . m BioUML development history ({{R}} - →2009)
- 10:55, 4 June 2013 (diff | hist) . . (+4) . . m BioUML development history (BioUML link)
- 10:52, 4 June 2013 (diff | hist) . . (+156) . . m BioUML development history (Links - →2011)
- 18:05, 3 June 2013 (diff | hist) . . (+5) . . m BioUML development history (Workflows link - →2011)
- 16:58, 3 June 2013 (diff | hist) . . (+22) . . GeneNet (→User interface)
- 16:55, 3 June 2013 (diff | hist) . . (+12) . . m MGL (TRRD, {{EPD}} used)
- 16:54, 3 June 2013 (diff | hist) . . (-22) . . GeneNet
- 16:54, 3 June 2013 (diff | hist) . . (+29) . . N Template:EPD (Link to EPD database) (top)
- 16:53, 3 June 2013 (diff | hist) . . (+44) . . m MGL (Links - →MGL possibilities)
- 16:52, 3 June 2013 (diff | hist) . . (-111) . . m GeneNet (Links rectified)
- 16:46, 3 June 2013 (diff | hist) . . (-204) . . Transplorer
- 16:46, 3 June 2013 (diff | hist) . . (+114) . . N Template:TRANSFAC (Link to TRANSFAC) (top)
- 16:35, 3 June 2013 (diff | hist) . . (+256) . . Perspective (+Perspectives gallery)
- 16:24, 3 June 2013 (diff | hist) . . (+897) . . N Analyses (extension point) (Created page with "{{Extension point|analyses|ru.biosoft.galaxy|since=0.9.3|registry=ru.biosoft.galaxy.AnalysesOverridesRegistry}} === Description === This extension point currently allows to hi...") (top)
- 16:19, 3 June 2013 (diff | hist) . . (+12) . . TRRD viewer (Redirected page to TRRD#TRRD-Viewer) (top)
- 16:18, 3 June 2013 (diff | hist) . . (+21) . . m TRRD (TRRD-Viewer sub-section)
- 16:17, 3 June 2013 (diff | hist) . . (+18) . . N TRRD viewer (Lan@dote.ru moved page TRRD viewer to TRRD: This page is devoted not only to TRRD viewer, but to TRRD database as well.)
- 16:17, 3 June 2013 (diff | hist) . . (0) . . m TRRD (Lan@dote.ru moved page TRRD viewer to TRRD: This page is devoted not only to TRRD viewer, but to TRRD database as well.)
- 16:15, 3 June 2013 (diff | hist) . . (+2) . . m GeneNet (TRRD linked - →Formalized description)
- 16:08, 3 June 2013 (diff | hist) . . (+40) . . Transplorer (File formats linked)
- 16:02, 3 June 2013 (diff | hist) . . (+2,599) . . N Types (extension point) (Created page with "{{Extension point|types|ru.biosoft.galaxy|since=0.9.3|registry=ru.biosoft.galaxy.FormatRegistry}} === Description === This extension point allows to map {{Galaxy}} data types ...") (top)
- 11:09, 31 May 2013 (diff | hist) . . (+43) . . m MGL
- 11:07, 31 May 2013 (diff | hist) . . (+17) . . N Molecular Genetics Library (Redirected page to MGL) (top)
- 17:40, 30 May 2013 (diff | hist) . . (+1,065) . . N Folder (element type) (Created page with "{{Element type|folder|ru.biosoft.access.generic.GenericDataCollection}} === Description === [[File:Type-folder-new-folder-creation-web.png|thumb|"New folder" option in right-c...") (top)
- 17:32, 30 May 2013 (diff | hist) . . (0) . . N File:Type-folder-new-folder-creation-web.png (top)
- 15:29, 30 May 2013 (diff | hist) . . (+31) . . m Download (Reformatted (list restored))
- 10:12, 30 May 2013 (diff | hist) . . (0) . . N File:MGLsystem.png (top)
- 10:12, 30 May 2013 (diff | hist) . . (0) . . m MGL (MGLsystem.gif -> MGLsystem.png)
- 10:51, 28 May 2013 (diff | hist) . . (+35) . . Method description HTML file (+DL, DT, DD for definition lists) (top)
- 11:18, 20 May 2013 (diff | hist) . . (+81) . . BioHub (+Biohub (extension point)) (top)
- 11:17, 20 May 2013 (diff | hist) . . (+2,791) . . N Biohub (extension point) (Created page with "{{Extension point|biohub|ru.biosoft.access|registry=ru.biosoft.access.biohub.BioHubRegistry}} === Description === This extension point allows you to register a BioHub. ==...") (top)
- 17:41, 17 May 2013 (diff | hist) . . (-17) . . BioUML user interface
- 17:41, 17 May 2013 (diff | hist) . . (-17) . . GeneXplain (wikipedia: namespace used)
- 17:40, 17 May 2013 (diff | hist) . . (-17) . . m BioUML server (wikipedia: namespace used)
- 17:40, 17 May 2013 (diff | hist) . . (-34) . . BioUML workbench
- 17:37, 17 May 2013 (diff | hist) . . (-34) . . m Workflow (wikipedia: namespace used)
- 17:35, 17 May 2013 (diff | hist) . . (-53) . . Workflow (wikipedia: namespace used)
- 17:34, 17 May 2013 (diff | hist) . . (-30) . . m Features (wikipedia: namespace used)
- 17:33, 17 May 2013 (diff | hist) . . (-171) . . BioUML
- 17:28, 17 May 2013 (diff | hist) . . (-34) . . BioUML web edition (wikipedia: namespace used)
- 17:23, 17 May 2013 (diff | hist) . . (+128) . . m Profile (element type) (+Site search on track (analysis)) (top)
- 17:21, 17 May 2013 (diff | hist) . . (+596) . . N Profile (element type) (Created page with "{{Element type|profile|ru.biosoft.bsa.SiteModelCollection}} === Description === Profile is the collection of {{Type link|site model}}s. Usually it's preinstalled in some datab...")
- 17:21, 17 May 2013 (diff | hist) . . (0) . . N File:Type-profile-web-table-editing.png (top)
- 17:15, 17 May 2013 (diff | hist) . . (+1) . . m Site model (element type) (Cosmetic - →Description) (top)
- 17:14, 17 May 2013 (diff | hist) . . (+50) . . m Site model (element type) (Picture label changed)
- 17:13, 17 May 2013 (diff | hist) . . (0) . . N File:Type-site-model-info-box-web.png (top)
- 17:11, 17 May 2013 (diff | hist) . . (+149) . . Site model (element type) (+Change profile cutoffs (analysis))
- 17:08, 17 May 2013 (diff | hist) . . (+1,056) . . N Site model (element type) (Created page with "{{Element type|site model|ru.biosoft.bsa.SiteModel}} === Description === Site model description exampleSite model is the mathem...")
- 17:04, 17 May 2013 (diff | hist) . . (-72) . . Matrix (element type) (-Create weight matrix model) (top)
- 16:52, 17 May 2013 (diff | hist) . . (+67) . . m Template:Type link (Usage) (top)
- 16:52, 17 May 2013 (diff | hist) . . (+536) . . N Matrix library (element type) (Created page with "{{Element type|matrix library|ru.biosoft.bsa.analysis.WeightMatrixCollection}} === Description === Matrix library is the collection of {{Type link|matrix|matrices}}. Usually i...") (top)
- 16:50, 17 May 2013 (diff | hist) . . (0) . . N File:Type-matrix-library-web-table.png (top)
- 16:43, 17 May 2013 (diff | hist) . . (+17) . . Matrix (element type)
- 16:42, 17 May 2013 (diff | hist) . . (+8) . . Template:Type link
- 16:38, 17 May 2013 (diff | hist) . . (+20) . . m Matrix (element type) (+Description headline)
- 16:32, 17 May 2013 (diff | hist) . . (-38) . . Matrix (element type) ({{Type link}} used)
- 16:31, 17 May 2013 (diff | hist) . . (-10) . . File (element type) ({{Type link}} used) (top)
- 16:30, 17 May 2013 (diff | hist) . . (-28) . . Galaxy method (element type) ({{Type link}} used) (top)
- 16:30, 17 May 2013 (diff | hist) . . (+2) . . m Template:Type link (Fix)
- 16:29, 17 May 2013 (diff | hist) . . (+240) . . N Template:Type link (Created page with "<noinclude>Link to element type with icon. Usage: <nowiki>{{Type link|<type_name>}}</nowiki></noinclude><includeonly>[[File:Type-{{#replace:{{{1}}...")
- 16:15, 17 May 2013 (diff | hist) . . (0) . . N File:Type-matrix-info-box-example.png (top)
- 16:15, 17 May 2013 (diff | hist) . . (+111) . . Matrix (element type)
- 15:52, 17 May 2013 (diff | hist) . . (+946) . . N Matrix (element type) (Created page with "{{Element type|matrix|ru.biosoft.bsa.analysis.FrequencyMatrix}} Matrix element type represents a position weight matrix (PWM) wh...")
- 10:18, 17 May 2013 (diff | hist) . . (-1) . . m Perspective (Typo fixed - →Development)
- 10:13, 17 May 2013 (diff | hist) . . (+495) . . N Galaxy method (element type) (Created page with "{{Element type|galaxy method|ru.biosoft.galaxy.GalaxyMethodInfo}} === Description === This is a special subtype of analysis element type which is d...")
- 10:09, 17 May 2013 (diff | hist) . . (+17) . . Template:Element type (top)
- 18:04, 16 May 2013 (diff | hist) . . (+1,190) . . N Analysis (element type) (Created page with "{{Element type|analysis|ru.biosoft.analysis.AnalysisMethodInfo}} === Description === This element represents BioUML analysis method. Usually it has different icon as it's ...") (top)
- 18:03, 16 May 2013 (diff | hist) . . (0) . . File:Type-analysis-screenshot-workbench.png (Lan@dote.ru uploaded a new version of "File:Type-analysis-screenshot-workbench.png") (top)
- 18:02, 16 May 2013 (diff | hist) . . (0) . . N File:Type-analysis-screenshot-workbench.png
- 17:58, 16 May 2013 (diff | hist) . . (0) . . File:Type-analysis-screenshot-web.png (Lan@dote.ru uploaded a new version of "File:Type-analysis-screenshot-web.png") (top)
- 17:55, 16 May 2013 (diff | hist) . . (0) . . N File:Type-analysis-screenshot-web.png
- 17:10, 16 May 2013 (diff | hist) . . (+1) . . m Autosome.Ru (workflows link fixed) (top)
- 17:09, 16 May 2013 (diff | hist) . . (+59) . . Autosome.Ru (+workflows)
- 16:06, 16 May 2013 (diff | hist) . . (+133) . . BioUML wiki Bot
- 16:01, 16 May 2013 (diff | hist) . . (+24) . . m Autosome.Ru (+Category:Companies)
- 16:01, 16 May 2013 (diff | hist) . . (0) . . Softberry, Inc. (top)
- 16:00, 16 May 2013 (diff | hist) . . (0) . . N File:Softberry logo.png (top)
- 16:00, 16 May 2013 (diff | hist) . . (+33) . . Softberry, Inc.
- 15:58, 16 May 2013 (diff | hist) . . (+87) . . Softberry, Inc. (+plugins category link)
- 15:48, 16 May 2013 (diff | hist) . . (+31) . . BioUML user interface (+See also: Perspective link)
- 15:47, 16 May 2013 (diff | hist) . . (+4) . . m Softberry (perspective) (perspective) (top)
- 15:47, 16 May 2013 (diff | hist) . . (+4) . . m GTRD (perspective) (perspective) (top)
- 15:47, 16 May 2013 (diff | hist) . . (+4) . . m ChIPMunk (perspective) (perspective) (top)
- 15:46, 16 May 2013 (diff | hist) . . (+4) . . Default (perspective) (top)
- 15:46, 16 May 2013 (diff | hist) . . (0) . . N File:Perspective-Default-web.png (top)
- 15:46, 16 May 2013 (diff | hist) . . (+164) . . N Default (perspective) (Created page with "{{Perspective|Default|provider=Institute of Systems Biology}} This perspective is used by default. Standard repository tabs and all viewparts are available.")
- 15:43, 16 May 2013 (diff | hist) . . (+67) . . Perspective
- 15:43, 16 May 2013 (diff | hist) . . (+285) . . N Softberry, Inc. (Created page with "{{Stub}} '''Softberry Inc.''' is a leading developer of software tools for genomic research. === Contacts === ;Web-site :http://softberry.com/ ;Postal address :116 Radio Cir...")
- 15:40, 16 May 2013 (diff | hist) . . (+20) . . Template:Perspective (top)
- 15:39, 16 May 2013 (diff | hist) . . (0) . . N File:Perspective-GTRD-web.png (top)
- 15:38, 16 May 2013 (diff | hist) . . (+131) . . N GTRD (perspective) (Created page with "{{Perspective|GTRD|provider=Institute of Systems Biology}} This perspective was created for convenient work with GTRD database.")
- 15:35, 16 May 2013 (diff | hist) . . (0) . . N File:Perspective-Softberry-web.png (top)
- 15:35, 16 May 2013 (diff | hist) . . (+107) . . N Softberry (perspective) (Created page with "{{Perspective|Softberry|provider=Softberry, Inc.}} This perspective was created to support Softberry tools.")
- 15:30, 16 May 2013 (diff | hist) . . (+180) . . Template:Perspective
- 15:28, 16 May 2013 (diff | hist) . . (+21) . . ChIPMunk (perspective)
- 15:27, 16 May 2013 (diff | hist) . . (+10) . . ChIPMunk (perspective) (Link fixed)
- 15:27, 16 May 2013 (diff | hist) . . (+31) . . N Category:Perspectives (Created page with "List of known perspectives.") (top)
- 15:26, 16 May 2013 (diff | hist) . . (0) . . N File:Perspective-ChIPMunk-web.png (top)
- 15:26, 16 May 2013 (diff | hist) . . (+118) . . N ChIPMunk (perspective) (Created page with "{{Perspective|ChIPMunk}} This perspective was created to focus on the ChIPMunk analyses.")
- 15:25, 16 May 2013 (diff | hist) . . (+226) . . N Template:Perspective (Created page with "<noinclude>Usage: <nowiki>{{Perspective|<perspective_name>}}</nowiki></noinclude><includeonly>[[File:perspective-{{{1}}}-web.png|thumb|[[BioUML web edition]] with {{{1}}} per...")
- 15:12, 16 May 2013 (diff | hist) . . (+68) . . Host object (extension point) (+link to list of host objects) (top)
- 14:59, 16 May 2013 (diff | hist) . . (+66) . . N Category:Host objects (Created page with "List of JavaScript host objects.") (top)
- 11:04, 16 May 2013 (diff | hist) . . (+281) . . N Html (element type) (Created page with "{{Element type|html|ru.biosoft.access.HtmlDataElement}} === Description === This type represents HTML file. In BioUML you can import, export or view them (bu...") (top)
- 10:55, 16 May 2013 (diff | hist) . . (+120) . . Perspective (extension point)
- 10:53, 16 May 2013 (diff | hist) . . (+3,055) . . N Perspective (extension point) (Created page with "{{Extension point|perspective|biouml.workbench|since=0.9.3|registry=biouml.workbench.perspective.PerspectiveRegistry}} === Description === This extension point allows you to a...")
- 10:31, 16 May 2013 (diff | hist) . . (+53) . . Perspective
- 10:30, 16 May 2013 (diff | hist) . . (+14) . . Template:Stub
- 10:29, 16 May 2013 (diff | hist) . . (+70) . . Perspective (+If this select box is absent, then only one perspective is available.)
- 10:25, 16 May 2013 (diff | hist) . . (+1,009) . . N Perspective (Created page with "{{Stub}} '''Perspective''' is a set of user interface settings which change the outlook of BioUML workbench or BioUML web edition so the user can concentrate on the s...")
- 10:22, 16 May 2013 (diff | hist) . . (0) . . File:Perspective-selection-web.png (Lan@dote.ru uploaded a new version of "File:Perspective-selection-web.png") (top)
- 10:21, 16 May 2013 (diff | hist) . . (0) . . N File:Perspective-selection-workbench.png (top)
- 10:21, 16 May 2013 (diff | hist) . . (0) . . N File:Perspective-selection-web.png
- 10:39, 15 May 2013 (diff | hist) . . (+1,284) . . N Reference type (Created page with "'''Reference type''' is a sort of accession numbers of any biological objects which may be handled by BioUML. An example of reference type is [[Genes - Ensembl|Ensembl gen...")
- 10:36, 15 May 2013 (diff | hist) . . (-736) . . Reference type (extension point) (Reference types information is moved to separate page.) (top)
- 18:11, 14 May 2013 (diff | hist) . . (+53) . . N Category:Reference types (Created page with "List of reference types registered in BioUML.") (top)
- 11:10, 14 May 2013 (diff | hist) . . (+1,031) . . N BioHub (Created page with "{{Stub}} '''BioHub''' is a general concept in BioUML. It represents some functional entity which is able to match biological objects to some other objects using some matc...")
- 11:03, 14 May 2013 (diff | hist) . . (+36) . . N Category:BioHub (Created page with "Pages related to BioHub concept.") (top)
- 11:03, 14 May 2013 (diff | hist) . . (+391) . . N Matching BioHub (Created page with "{{Stub}} '''Matching BioHub''' is a kind of BioHub which allows you to match a list of identifiers from one reference type to another...")
- 10:57, 14 May 2013 (diff | hist) . . (+1,487) . . N Annotation (extension point) (From Help&Manual) (top)
- 10:49, 14 May 2013 (diff | hist) . . (+10) . . Preprocessor (extension point) (→Configuration Markup) (top)
- 10:49, 14 May 2013 (diff | hist) . . (+979) . . N Preprocessor (extension point) (From Help&Manual)
- 10:44, 14 May 2013 (diff | hist) . . (+996) . . N Type driver (extension point) (From Help&Manual) (top)
- 10:38, 14 May 2013 (diff | hist) . . (+952) . . N Virtual collection (extension point) (Created page with "{{Extension point|virtualCollection|ru.biosoft.access|since=0.9.3}} === Description === Virtual collection is root data collection which contains links to another collections....") (top)
- 10:26, 14 May 2013 (diff | hist) . . (+2) . . Text (element type) (<gallery> fixed - →Description) (top)
- 10:26, 14 May 2013 (diff | hist) . . (+456) . . N Text (element type) (Created page with "{{Element type|text|ru.biosoft.access.TextDataElement}} === Description === This is a generic text file which format is unknown for BioUML. You can import these files usin...")
- 10:25, 14 May 2013 (diff | hist) . . (0) . . N File:Type-text-web-editing.png (top)
- 10:18, 14 May 2013 (diff | hist) . . (+171) . . File (element type) (text element note added)
- 10:15, 14 May 2013 (diff | hist) . . (0) . . File:Type-file-reimport.png (Lan@dote.ru uploaded a new version of "File:Type-file-reimport.png") (top)
- 10:15, 14 May 2013 (diff | hist) . . (0) . . N File:Type-file-reimport.png
- 10:15, 14 May 2013 (diff | hist) . . (+506) . . File (element type) (Reimport described)
- 18:29, 13 May 2013 (diff | hist) . . (0) . . File (element type) (→Description)
- 18:27, 13 May 2013 (diff | hist) . . (+427) . . N File (element type) (Created page with "{{Element type|file|ru.biosoft.access.FileDataElement}} === Description === This is a generic file element which format is unknown for BioUML. It can be imported or export...")
- 18:09, 13 May 2013 (diff | hist) . . (-17) . . MediaWiki:Sidebar
- 18:06, 13 May 2013 (diff | hist) . . (+6) . . MediaWiki:Sidebar
- 18:05, 13 May 2013 (diff | hist) . . (-16) . . MediaWiki:Sidebar
- 18:05, 13 May 2013 (diff | hist) . . (+47) . . MediaWiki:Sidebar
- 17:58, 13 May 2013 (diff | hist) . . (+32) . . BioUML wiki (+Plugins - →For administrators/developers)
- 17:55, 13 May 2013 (diff | hist) . . (+1,903) . . N Transformer (extension point) (Created page with "{{Extension point|transformer|ru.biosoft.access|registry=ru.biosoft.access.generic.TransformerRegistry}} === Description === Transformer classes should be registered if you wa...")
- 17:41, 13 May 2013 (diff | hist) . . (-12) . . m Context item (extension point) (Formatting - →Configuration Markup) (top)
- 17:41, 13 May 2013 (diff | hist) . . (+1,163) . . N Context item (extension point) (Created page with "{{Extension point|template|ru.biosoft.templates|since=0.8.7|registry=ru.biosoft.templates.TemplateRegistry}} === Description === This extension allows you to add objects which...")
- 17:35, 13 May 2013 (diff | hist) . . (+27) . . Template (extension point) (top)
- 17:08, 13 May 2013 (diff | hist) . . (+35) . . Template (extension point) (Formatting - →Examples)
- 17:08, 13 May 2013 (diff | hist) . . (+3) . . m Template (extension point) (Formatting)
- 17:02, 13 May 2013 (diff | hist) . . (+1,258) . . N Template (extension point) (Created page with "{{Extension point|template|ru.biosoft.templates|since=0.8.7|registry=ru.biosoft.templates.TemplateRegistry}} === Description === Templates allows to get different view for dat...")
- 16:58, 13 May 2013 (diff | hist) . . (+1,181) . . N Wizard page (extension point) (From Help&Manual)
- 16:57, 13 May 2013 (diff | hist) . . (0) . . N File:Workbench-wizard-page-screenshot.png (top)
- 16:54, 13 May 2013 (diff | hist) . . (+36) . . Visible plugin (extension point) (+registry) (top)
- 16:53, 13 May 2013 (diff | hist) . . (+10) . . Visible plugin (extension point)
- 16:53, 13 May 2013 (diff | hist) . . (+1,385) . . N Visible plugin (extension point) (From Help&Manual)
- 16:43, 13 May 2013 (diff | hist) . . (-10) . . BioUML (-{{Stub}})
- 16:14, 13 May 2013 (diff | hist) . . (+56) . . Beans (extension point) (top)
- 16:13, 13 May 2013 (diff | hist) . . (+241) . . N Template:Method (Created page with "<noinclude>Usage: <nowiki>{{Method|<fully_qualified_Java_method_name>}}</nowiki> </noinclude><includeonly><code title="{{{1}}}" style="border-bottom: 1px dotted black">{{#exp...") (top)
- 16:12, 13 May 2013 (diff | hist) . . (+18) . . Moved class (extension point) ({{Method}}) (top)
- 16:10, 13 May 2013 (diff | hist) . . (-3) . . Template:Element type
- 16:09, 13 May 2013 (diff | hist) . . (+50) . . m Common class (extension point) ({{Class}})
- 16:07, 13 May 2013 (diff | hist) . . (+75) . . Template:Annotation (top)
- 16:06, 13 May 2013 (diff | hist) . . (+40) . . Template:Class (top)
- 16:05, 13 May 2013 (diff | hist) . . (+16) . . Template:Class
- 16:04, 13 May 2013 (diff | hist) . . (-3) . . m Beans (extension point) ({{Class}})
- 16:03, 13 May 2013 (diff | hist) . . (+18) . . Template:Class
- 15:57, 13 May 2013 (diff | hist) . . (+10) . . Service (extension point) ({{Class}}) (top)
- 15:57, 13 May 2013 (diff | hist) . . (+10) . . m Host object (extension point) ({{Annotation}})
- 15:56, 13 May 2013 (diff | hist) . . (+144) . . N Template:Annotation (Created page with "<noinclude>Usage: <nowiki>{{Annotation|<fully_qualified_Java_class_name>}}</nowiki> </noinclude><includeonly><code>{{{1}}}</code></includeonly>")
- 15:56, 13 May 2013 (diff | hist) . . (+33) . . Reference type (extension point)
- 15:54, 13 May 2013 (diff | hist) . . (-187) . . Method (extension point) ({{Class}})
- 15:53, 13 May 2013 (diff | hist) . . (+33) . . m Host object (extension point) ({{Class}})
- 15:51, 13 May 2013 (diff | hist) . . (+75) . . m Export (extension point) ({{Class}}) (top)
- 15:50, 13 May 2013 (diff | hist) . . (-3) . . m Diagram view part (extension point) ({{Class}})
- 15:50, 13 May 2013 (diff | hist) . . (-3) . . Diagram view part (extension point) ({{Class}})
- 15:49, 13 May 2013 (diff | hist) . . (-3) . . m Common class (extension point) ({{Class}})
- 15:48, 13 May 2013 (diff | hist) . . (+9) . . Template:Extension point (top)
- 15:48, 13 May 2013 (diff | hist) . . (+2,524) . . N Beans (extension point) (Created page with "{{Extension point|beans|ru.biosoft.access|since=0.9.4|registry=ru.biosoft.access.BeanRegistry}} === Description === This extension point allows you to resolve Java objects by ...")
- 15:46, 13 May 2013 (diff | hist) . . (+139) . . N Template:Class (Created page with "<noinclude>Usage: <nowiki>{{Class|<fully_qualified_Java_class_name>}}</nowiki> </noinclude><includeonly><code>{{{1}}}</code></includeonly>")
- 12:44, 13 May 2013 (diff | hist) . . (0) . . File:Type-image-web-cma-histogram.png (Lan@dote.ru uploaded a new version of "File:Type-image-web-cma-histogram.png": Browser UI cropped) (top)
- 11:29, 13 May 2013 (diff | hist) . . (+4) . . m Image (element type) (repository) (top)
- 11:21, 13 May 2013 (diff | hist) . . (+2) . . Image (element type)
- 11:20, 13 May 2013 (diff | hist) . . (0) . . N File:Type-image-web-cma-histogram.png
- 11:20, 13 May 2013 (diff | hist) . . (+209) . . Image (element type)
- 11:14, 13 May 2013 (diff | hist) . . (0) . . N File:Type-image-workbench-venn-diagram.png (top)
- 11:13, 13 May 2013 (diff | hist) . . (+171) . . Image (element type)
- 11:05, 13 May 2013 (diff | hist) . . (+67) . . N Category:Element types (Created page with "Types of elements which appear in BioUML repository.")
- 11:05, 13 May 2013 (diff | hist) . . (+248) . . Image (element type)
- 11:02, 13 May 2013 (diff | hist) . . (+35) . . Image (element type)
- 11:01, 13 May 2013 (diff | hist) . . (+42) . . Template:Element type
- 11:01, 13 May 2013 (diff | hist) . . (+22) . . N Image (element type) (Created page with "{{Element type|image}}")
- 11:01, 13 May 2013 (diff | hist) . . (+2) . . Template:Element type
- 10:59, 13 May 2013 (diff | hist) . . (+238) . . N Template:Element type (Created page with "<noinclude> == Usage == Add once at the top of extension point page: <nowiki>{{Element type|<type name>}}</nowiki> </noinclude> <includeonly>__NOTOC__ [[Category:Element type...")
- 10:56, 13 May 2013 (diff | hist) . . (-258) . . Common class (extension point) (Added info about Template:Element types generation.)
- 18:41, 8 May 2013 (diff | hist) . . (+18) . . BioUML user interface (→List of icons)
- 17:07, 8 May 2013 (diff | hist) . . (+2,490) . . N Reference type (extension point) (Created page with "{{Extension point|referenceType|ru.biosoft.access|registry=ru.biosoft.access.biohub.ReferenceTypeRegistry}} === Description === This extension point allows you to define new t...")
- 16:32, 8 May 2013 (diff | hist) . . (-84) . . BioUML user interface (See also section removed (all links are already present on the page))
- 16:30, 8 May 2013 (diff | hist) . . (+108) . . Viewpart
- 16:29, 8 May 2013 (diff | hist) . . (+117) . . Repository pane toolbar
- 16:28, 8 May 2013 (diff | hist) . . (+110) . . Repository pane
- 16:27, 8 May 2013 (diff | hist) . . (+941) . . N Service (extension point) (Created page with "{{Extension point|service|ru.biosoft.server}} === Description === Service is the way to communicate between BioUML client and BioUML server. Standard BioUML services are A...")
- 16:21, 8 May 2013 (diff | hist) . . (-2) . . Template:Extension point
- 16:21, 8 May 2013 (diff | hist) . . (+731) . . N Solver (extension point) (Created page with "{{Extension point|solver|biouml.plugins.simulation}} === Description === This extension point allows to define new solver for model simulation. === Configuration Markup === ...") (top)
- 16:18, 8 May 2013 (diff | hist) . . (-1) . . m Common class (extension point) (Cosmetic)
- 16:15, 8 May 2013 (diff | hist) . . (-2) . . Template:Extension point
- 16:14, 8 May 2013 (diff | hist) . . (+13) . . Template:Extension point
- 16:13, 8 May 2013 (diff | hist) . . (+18) . . Template:Extension point
- 16:12, 8 May 2013 (diff | hist) . . (+210) . . Template:Extension point
- 16:08, 8 May 2013 (diff | hist) . . (-95) . . Moved class (extension point) (Template used)
- 16:07, 8 May 2013 (diff | hist) . . (-99) . . Method (extension point)
- 16:07, 8 May 2013 (diff | hist) . . (+56) . . Template:Extension point
- 16:06, 8 May 2013 (diff | hist) . . (-101) . . Look and feel (extension point) (Template used) (top)
- 16:04, 8 May 2013 (diff | hist) . . (-108) . . Host object (extension point) (Template used)
- 16:04, 8 May 2013 (diff | hist) . . (-1) . . m Diagram view part (extension point) (Cosmetic)
- 16:03, 8 May 2013 (diff | hist) . . (-95) . . Export (extension point) (Template used)
- 16:02, 8 May 2013 (diff | hist) . . (-2) . . Template:Extension point
- 16:01, 8 May 2013 (diff | hist) . . (-90) . . Diagram view part (extension point) (Template used)
- 16:01, 8 May 2013 (diff | hist) . . (-94) . . Common class (extension point) (Template used)
- 16:00, 8 May 2013 (diff | hist) . . (+1) . . Template:Extension point
- 15:56, 8 May 2013 (diff | hist) . . (+51) . . Template:Extension point
- 15:51, 8 May 2013 (diff | hist) . . (+106) . . N Template:Extension point (Created page with "__NOTOC__ Category:Extension points ;Identifier :{{{2}}}.{{{1}}} ;Plugin :[[{{{2}}} (plugin)|{{{2}}}]]")
- 15:47, 8 May 2013 (diff | hist) . . (+1,601) . . N Look and feel (extension point) (Created page with "__NOTOC__ ;Identifier :ru.biosoft.workbench.lookAndFeel ;Plugin :ru.biosoft.workbench ;Since :0.7.6 ;Applicable for :BioUML workbench ==...")
- 15:39, 8 May 2013 (diff | hist) . . (+3) . . m BioUML development history (→2003 - 2007)
- 12:59, 8 May 2013 (diff | hist) . . (+1,356) . . N Common class (extension point) (Created page with "__NOTOC__ ;Identifier :ru.biosoft.access.commonClass ;Plugin :ru.biosoft.access ;Since :0.9.3 === Motivation === Client-side JavaScript code of...")
- 12:42, 8 May 2013 (diff | hist) . . (+26) . . Category:Plugins (+Category:Development)
- 12:40, 8 May 2013 (diff | hist) . . (+65) . . m BioUML development history (Links - →2012 - 2013)
- 12:29, 8 May 2013 (diff | hist) . . (+2,048) . . N Moved class (extension point) (Created page with "__NOTOC__ ;Identifier :ru.biosoft.access.movedClass ;Plugin :ru.biosoft.access ;Since :0.9.4 === Motivation === Sometimes it's desirable to ren...")
- 12:06, 8 May 2013 (diff | hist) . . (+30) . . BioUML user interface (+Repository pane toolbar)
- 12:06, 8 May 2013 (diff | hist) . . (+459) . . N Repository pane toolbar (Created page with "[[BioUML web edition interface. Repository pane toolbar is marked as (F).]] {{Stub}} '''Repository pane toolbar''' is the toolbar located a...")
- 11:10, 8 May 2013 (diff | hist) . . (+4) . . GeneXplain
- 11:09, 8 May 2013 (diff | hist) . . (+4) . . m GeneXplain (link to ISB)
- 11:06, 8 May 2013 (diff | hist) . . (+3) . . m Features ({{R}} - →Supported standards)
- 10:40, 8 May 2013 (diff | hist) . . (+351) . . N Autosome.Ru (Created page with "Autosome.Ru is the collaboration by [http://www.vigg.ru/ VIGG] and [http://www.eimb.ru/ EIMB] bioinformatics laboratories. Some software developed by this collaboration is inc...")
- 10:36, 8 May 2013 (diff | hist) . . (+13) . . m BioUML web edition (Formatting - →User interface)
- 10:35, 8 May 2013 (diff | hist) . . (+69) . . BioUML user interface (+picture)
- 10:34, 8 May 2013 (diff | hist) . . (+29) . . m BioUML user interface (+Category:User interface)
- 10:34, 8 May 2013 (diff | hist) . . (+29) . . m Viewpart (+Category:User interface)
- 10:33, 8 May 2013 (diff | hist) . . (+65) . . N Category:User interface (Created page with "Pages related to user interface of all BioUML-based products.") (top)
- 10:32, 8 May 2013 (diff | hist) . . (+29) . . Repository pane
- 10:32, 8 May 2013 (diff | hist) . . (+22) . . BioUML user interface (Repository pane)
- 10:31, 8 May 2013 (diff | hist) . . (+992) . . N Repository pane (Created page with "[[BioUML web edition interface. Repository pane is marked as (A).]] {{Stub}} '''Repository pane''' (or '''navigation pane''', or simply '''...")
- 17:02, 7 May 2013 (diff | hist) . . (+28) . . BioUML web edition (Terms, linking - →User interface)
- 16:59, 7 May 2013 (diff | hist) . . (+80) . . Method description HTML file (%analysisName%)
- 16:56, 7 May 2013 (diff | hist) . . (+232) . . Features (Links to optimization methods - →Parameters fitting)
- 16:52, 7 May 2013 (diff | hist) . . (+52) . . m BioUML (Links - →Plug-in based architecture)
- 16:44, 7 May 2013 (diff | hist) . . (+52) . . Institute of Systems Biology (+plugins) (top)
- 16:44, 7 May 2013 (diff | hist) . . (+71) . . GeneXplain GmbH (+plugins) (top)
- 16:26, 7 May 2013 (diff | hist) . . (+15) . . Server administrator
- 16:25, 7 May 2013 (diff | hist) . . (+324) . . N Server administrator (Created page with "{{Stub}} BioUML server administrator is the special role which can be assigned to the BioStore user. Upon logging in server administrator gains full control on BioUML...")
- 16:05, 7 May 2013 (diff | hist) . . (+21) . . m Long-term model of the CVS/Renal system (Modular modeling link)
- 14:01, 7 May 2013 (diff | hist) . . (+27) . . m BioUML development history (Link to Using Galaxy in BioUML - →2012 - 2013)
- 13:20, 7 May 2013 (diff | hist) . . (+56) . . Diagram view part (extension point) (+plugin)
- 13:20, 7 May 2013 (diff | hist) . . (+62) . . Method (extension point) (+plugin)
- 13:19, 7 May 2013 (diff | hist) . . (+82) . . Host object (extension point) (+plugin)
- 13:18, 7 May 2013 (diff | hist) . . (+58) . . Export (extension point) (+plugin)
- 12:58, 7 May 2013 (diff | hist) . . (0) . . Method (extension point) (→JavaScript implementation)
- 12:58, 7 May 2013 (diff | hist) . . (0) . . m Host object (extension point) (Lan@dote.ru moved page Host Object (extension point) to Host object (extension point) without leaving a redirect)
- 12:57, 7 May 2013 (diff | hist) . . (+1) . . Method (extension point) (→JavaScript implementation)
- 12:57, 7 May 2013 (diff | hist) . . (0) . . m Host object (extension point) (Lan@dote.ru moved page HostObject (extension point) to Host Object (extension point) without leaving a redirect)
- 12:46, 7 May 2013 (diff | hist) . . (-171) . . BioUML team
- 12:45, 7 May 2013 (diff | hist) . . (-13) . . BioUML wiki Bot
- 12:44, 7 May 2013 (diff | hist) . . (+33) . . Tagir Valeev (top)
- 12:44, 7 May 2013 (diff | hist) . . (+151) . . BioUML wiki Bot
- 12:38, 7 May 2013 (diff | hist) . . (+17) . . N Template:New (Created page with "Image:new.png") (top)
- 12:38, 7 May 2013 (diff | hist) . . (-10) . . Presentations
- 12:37, 7 May 2013 (diff | hist) . . (+41) . . N File:New.png (From http://www.biouml.org/images/new.jpg) (top)
- 12:33, 7 May 2013 (diff | hist) . . (0) . . BioStore (Link to BDK fixed - →Downloads) (top)
- 12:31, 7 May 2013 (diff | hist) . . (+4) . . BioUML development history (Link to {{Galaxy}} - →2012 - 2013)
- 12:30, 7 May 2013 (diff | hist) . . (+23) . . BioUML development history (Links)
- 12:29, 7 May 2013 (diff | hist) . . (+24) . . m BioUML
- 12:20, 7 May 2013 (diff | hist) . . (+4) . . m Acknowledgements (BioUML link)
- 12:19, 7 May 2013 (diff | hist) . . (+9) . . m GO installation (Links)
- 12:18, 7 May 2013 (diff | hist) . . (+21) . . m Overall circulation model (Modular modeling link)
- 12:17, 7 May 2013 (diff | hist) . . (+15) . . m Short term model of the heart output regulation (Link to modular model) (top)
- 12:15, 7 May 2013 (diff | hist) . . (+4) . . Project (BioUML link)
- 12:15, 7 May 2013 (diff | hist) . . (+33) . . Project (Diagrams removed: there's no such collection actually. Tmp folder added.)
- 12:11, 7 May 2013 (diff | hist) . . (+27) . . Fedor Kolpakov
- 12:10, 7 May 2013 (diff | hist) . . (+289) . . BioUML team (Links to User pages)
- 10:51, 7 May 2013 (diff | hist) . . (+31) . . BioUML wiki Bot (+Plugins)
- 10:48, 7 May 2013 (diff | hist) . . (+4) . . m Category:Plugins
- 10:48, 7 May 2013 (diff | hist) . . (+28) . . N Category:Plugins (Created page with "List of known BioUML plugins")
- 12:54, 4 May 2013 (diff | hist) . . (-1) . . m MediaWiki:Sidebar
- 12:54, 4 May 2013 (diff | hist) . . (+1) . . m MediaWiki:Sidebar
- 12:52, 4 May 2013 (diff | hist) . . (+2) . . m Features (Link to workflows - →Other features)
- 12:52, 4 May 2013 (diff | hist) . . (+9) . . Features (BSA link fixed - →Analyses)
- 12:51, 4 May 2013 (diff | hist) . . (-89) . . Features (→Analyses)
- 20:15, 3 May 2013 (diff | hist) . . (+430) . . Workflow (On variable editing - →Cycles and scripts)
- 20:09, 3 May 2013 (diff | hist) . . (+73) . . m Workflow (<code> sections - →Cycles and scripts)
- 19:59, 3 May 2013 (diff | hist) . . (0) . . m BioUML wiki (Biostore -> BioStore - →Community)
- 14:54, 29 April 2013 (diff | hist) . . (0) . . m Features (BioUML Development history -> BioUML development history - →See also)
- 17:24, 27 April 2013 (diff | hist) . . (+1) . . BioUML workbench
- 17:13, 27 April 2013 (diff | hist) . . (+22) . . N Operations field (Redirected page to Viewpart) (top)
- 17:12, 27 April 2013 (diff | hist) . . (+136) . . Viewpart (screenshot, synonym)
- 17:09, 27 April 2013 (diff | hist) . . (+22) . . N Viewparts (Redirected page to Viewpart) (top)
- 17:07, 23 April 2013 (diff | hist) . . (+17) . . Category:Autogenerated pages (top)
- 11:52, 23 April 2013 (diff | hist) . . (+1,682) . . N Method description HTML file (Created page with "Method description HTML file is the HTML describing the method. This file must be located in the same plugin as the analysis itself. When you register your analysis method in ...")
- 11:19, 23 April 2013 (diff | hist) . . (-178) . . Method (extension point) (Method description HTML file as separate page)
- 15:15, 22 April 2013 (diff | hist) . . (+27) . . BioUML wiki (→For administrators/developers)
- 13:38, 19 April 2013 (diff | hist) . . (0) . . File:User interface.png (Lan@dote.ru uploaded a new version of "File:User interface.png": Reverted to version as of 06:27, 19 April 2013) (top)
- 13:21, 19 April 2013 (diff | hist) . . (0) . . Template:Draft
- 13:21, 19 April 2013 (diff | hist) . . (+328) . . N Template:Draft (Created page with "{| style="color:#000000; width: 70%; border:solid 1px #A8A8A8; padding:0.5em; margin:0.5em 0; background-color:#EE8080;font-size:95%; vertical-align:middle; text-align: center...")
- 13:07, 19 April 2013 (diff | hist) . . (+16) . . BioUML web edition (viewparts link)
- 13:00, 19 April 2013 (diff | hist) . . (+28) . . BioUML wiki
- 13:00, 19 April 2013 (diff | hist) . . (+40) . . N BioUML user interface (Created page with "{{Stub}} == See also == * Viewparts")
- 12:59, 19 April 2013 (diff | hist) . . (+10) . . m Viewpart (+{{Stub}})
- 12:58, 19 April 2013 (diff | hist) . . (+293) . . N Viewpart (Created page with "Viewparts are tabs in right-bottom part of the BioUML interface (both in BioUML workbench and in BioUML web edition). They provide different functionality. Some vi...")
- 12:56, 19 April 2013 (diff | hist) . . (+72) . . m Script viewpart (Picture captions)
- 12:56, 19 April 2013 (diff | hist) . . (0) . . N File:BioUML web edition script viewpart.png (top)
- 12:54, 19 April 2013 (diff | hist) . . (0) . . N File:BioUML workbench JavaScript viewpart.png (top)
- 12:52, 19 April 2013 (diff | hist) . . (+38) . . N Category:Viewparts (Created page with "List of BioUML viewparts.") (top)
- 12:52, 19 April 2013 (diff | hist) . . (+569) . . N Script viewpart (Created page with ";Viewpart title in BioUML workbench :JavaScript ;Viewpart title on BioUML web edition :Script Script viewpart allows you to type expressions in JavaScript languag...")
- 12:45, 19 April 2013 (diff | hist) . . (+5) . . m Category:Galaxy ({{Galaxy}} used)
- 12:44, 19 April 2013 (diff | hist) . . (+20) . . N Category:R (Created page with "{{R}}-related topics") (top)
- 12:44, 19 April 2013 (diff | hist) . . (+19) . . m R installation ({{R}} used; Category:R added)
- 12:44, 19 April 2013 (diff | hist) . . (+29) . . N Template:R (Created page with "[http://www.r-project.org/ R]") (top)
- 12:43, 19 April 2013 (diff | hist) . . (+205) . . N Using R in BioUML (Created page with "{{Stub}} {{R}} is a free software environment for statistical computing and graphics. It's possible to use some R capabilities directly from BioUML == See also == * [[R ...")
- 12:42, 19 April 2013 (diff | hist) . . (+20) . . m Creating Galaxy tool (+Category:Galaxy)
- 12:42, 19 April 2013 (diff | hist) . . (+20) . . m Galaxy installation (+Category:Galaxy)
- 12:42, 19 April 2013 (diff | hist) . . (+20) . . N Category:Galaxy (Created page with "Galaxy-related pages")
- 12:42, 19 April 2013 (diff | hist) . . (+10) . . Using Galaxy in BioUML (+{{Stub}}) (top)
- 12:41, 19 April 2013 (diff | hist) . . (+274) . . N Using Galaxy in BioUML (Created page with "{{Galaxy}} is an open, web-based platform for data intensive biomedical research. It's possible to integrate Galaxy into BioUML and use its analyses directly from BioUML i...")
- 12:39, 19 April 2013 (diff | hist) . . (+26) . . m Creating Galaxy tool (+Category:Development)
- 12:38, 19 April 2013 (diff | hist) . . (+21) . . MediaWiki:Sidebar (+Creating Galaxy tool)
- 12:38, 19 April 2013 (diff | hist) . . (+42) . . MediaWiki:Sidebar (+Creating Galaxy tool)
- 12:36, 19 April 2013 (diff | hist) . . (+33) . . N Category:Development (Created page with "BioUML development-related topics") (top)
- 12:36, 19 April 2013 (diff | hist) . . (+26) . . Category:Extension points
- 12:36, 19 April 2013 (diff | hist) . . (-345) . . Galaxy installation
- 12:33, 19 April 2013 (diff | hist) . . (+1,773) . . N Creating Galaxy tool (Created page with "If you have BioUML server installed and {{Galaxy}} installed, you can add your own tools to BioUML. == Customizing tool...")
- 12:19, 19 April 2013 (diff | hist) . . (+34) . . N Template:Galaxy (Created page with "[http://galaxyproject.org/ Galaxy]") (top)
- 12:13, 19 April 2013 (diff | hist) . . (+84) . . N Ilya Kiselev (Created page with "Ilya Kiselev. Developer at Institute of Systems Biology. BioUML developer.") (top)
- 12:13, 19 April 2013 (diff | hist) . . (+48) . . N Alexander Kel (Created page with "Alexander Kel, PhD. CEO of geneXplain GmbH.") (top)
- 12:12, 19 April 2013 (diff | hist) . . (+62) . . N Fedor Kolpakov (Created page with "Fedor Kolpakov, PhD. CEO of Institute of Systems Biology.")
- 12:11, 19 April 2013 (diff | hist) . . (+84) . . N Ivan Yevshin (Created page with "Ivan Yevshin. Developer at Institute of Systems Biology. BioUML developer.") (top)
- 12:11, 19 April 2013 (diff | hist) . . (+77) . . N Stanislav Loskutnikov (Created page with "Stanislav Loskutnikov. Technical writer at Institute of Systems Biology.") (top)
- 11:54, 19 April 2013 (diff | hist) . . (-34) . . m GeneXplain
- 11:53, 19 April 2013 (diff | hist) . . (+35) . . m BioUML wiki Bot (+Category:Workflows)
- 11:52, 19 April 2013 (diff | hist) . . (+11) . . N MediaWiki:Mainpage (Changed to BioUML wiki)
- 11:35, 19 April 2013 (diff | hist) . . (-17) . . BioUML wiki
- 11:35, 19 April 2013 (diff | hist) . . (+25) . . N Main Page (Lan@dote.ru moved page Main Page to BioUML wiki) (top)
- 11:35, 19 April 2013 (diff | hist) . . (0) . . m BioUML wiki (Lan@dote.ru moved page Main Page to BioUML wiki)
- 11:34, 19 April 2013 (diff | hist) . . (+166) . . GeneXplain
- 11:33, 19 April 2013 (diff | hist) . . (+17) . . BioUML wiki (+geneXplain)
- 11:17, 19 April 2013 (diff | hist) . . (+166) . . GeneXplain GmbH (+analyses & workflows categories links)
- 11:12, 19 April 2013 (diff | hist) . . (+71) . . Institute of Systems Biology (Link to Category:ISB analyses)
- 10:52, 19 April 2013 (diff | hist) . . (+3) . . N Template:GeneXplain current version (Created page with "2.3")
- 10:52, 19 April 2013 (diff | hist) . . (+27) . . GeneXplain
- 16:55, 18 April 2013 (diff | hist) . . (+60) . . Tagir Valeev
- 16:13, 18 April 2013 (diff | hist) . . (+118) . . GeneXplain GmbH
- 16:11, 18 April 2013 (diff | hist) . . (0) . . N File:GeneXplain logo.png (top)
- 16:11, 18 April 2013 (diff | hist) . . (+52) . . GeneXplain GmbH
- 16:10, 18 April 2013 (diff | hist) . . (+172) . . N GeneXplain GmbH (Created page with "geneXplain GmbH is a company located in Germany, which is responsible for geneXplain project. === Contacts === ;Web-site :http://genexplain.com Category:Companies")
- 16:09, 18 April 2013 (diff | hist) . . (+4) . . m Institute of Systems Biology (BioUML linked)
- 16:08, 18 April 2013 (diff | hist) . . (+80) . . N Category:Companies (Created page with "List of companies which are participating in development of BioUML platform.")
- 16:08, 18 April 2013 (diff | hist) . . (+24) . . m Institute of Systems Biology (+Category:Companies)
- 16:05, 18 April 2013 (diff | hist) . . (+401) . . N Institute of Systems Biology (Created page with "ISB logo {{Stub}} Institute of Systems Biology Ltd. (ISB) is a primary developer of BioUML platform. Director is Dr. Fedor Kolpakov. === Contact...")
- 15:15, 18 April 2013 (diff | hist) . . (+60) . . Workflow
- 15:12, 18 April 2013 (diff | hist) . . (+91) . . N Category:Workflows (Created page with "This category lists all public workflows available on BioUML or geneXplain servers.") (top)
- 17:23, 17 April 2013 (diff | hist) . . (-1) . . m BioStore (Typo fixed)
- 12:08, 17 April 2013 (diff | hist) . . (+6) . . m BioUML server installation
- 12:03, 17 April 2013 (diff | hist) . . (+1) . . m BioUML wiki
- 11:58, 17 April 2013 (diff | hist) . . (+3) . . BioUML wiki
- 11:58, 17 April 2013 (diff | hist) . . (+76) . . BioUML wiki
- 11:33, 17 April 2013 (diff | hist) . . (-92) . . BioUML server installation (Link to defines.js page)
- 11:22, 17 April 2013 (diff | hist) . . (-25) . . Defines.js
- 11:20, 17 April 2013 (diff | hist) . . (0) . . Defines.js (Sorting)
- 11:18, 17 April 2013 (diff | hist) . . (+163) . . Defines.js (+serverAddress)
- 11:13, 17 April 2013 (diff | hist) . . (-1) . . m Defines.js (grammar)
- 11:13, 17 April 2013 (diff | hist) . . (+3,476) . . N Defines.js (Created page with "defines.js is the JavaScript file located on BioUML server in $CATALINA_HOME/webapps/bioumlweb/ directory (see BioUML server installation). It contains some configuration ...")
- 16:19, 16 April 2013 (diff | hist) . . (+353) . . N BioUML Development Kit (Created page with "{{Stub}} BioUML development kit (BDK) is a subset of BioUML source code which is freely available for everybody. The current version of BDK is {{BioUML current version}}. To...") (top)
- 16:08, 16 April 2013 (diff | hist) . . (+30) . . BioUML wiki (→For administrators/developers)
- 15:25, 16 April 2013 (diff | hist) . . (+78) . . BioUML wiki (→Editing this wiki)
- 15:23, 16 April 2013 (diff | hist) . . (+10) . . BioUML wiki
- 15:23, 16 April 2013 (diff | hist) . . (+195) . . BioUML wiki
- 15:15, 16 April 2013 (diff | hist) . . (+23) . . BioUML wiki
- 15:14, 16 April 2013 (diff | hist) . . (+31) . . Short term model of the heart output regulation (+Category:Modular modeling)
- 15:14, 16 April 2013 (diff | hist) . . (+31) . . Long-term model of the CVS/Renal system (+Category:Modular modeling)
- 15:14, 16 April 2013 (diff | hist) . . (+30) . . Modular model of the human CVS v.1 (+Category:Modular modeling)
- 15:13, 16 April 2013 (diff | hist) . . (+30) . . Overall circulation model (+Category:Modular modeling)
- 15:13, 16 April 2013 (diff | hist) . . (+30) . . N Category:Modular modeling (Created page with "Modular modeling related pages") (top)
- 15:13, 16 April 2013 (diff | hist) . . (+31) . . Modular modeling (+Category:Modular modeling)
- 14:59, 16 April 2013 (diff | hist) . . (+26) . . Method (extension point)
- 14:58, 16 April 2013 (diff | hist) . . (-10) . . Host object (extension point)
- 14:58, 16 April 2013 (diff | hist) . . (+5,982) . . N Host object (extension point) (Created page with "__NOTOC__ ;Identifier :ru.biosoft.plugins.javascript.hostObject === Description === Using this extension point plug-in can provide access to particular Java objects (host obj...")
- 14:44, 16 April 2013 (diff | hist) . . (+2,274) . . N Method (extension point) (Created page with "__NOTOC__ ;Identifier :ru.biosoft.analysis.method ;Registry :ru.biosoft.analysis.AnalysisMethodRegistry === Description === This extension point allows you to define new anal...")
- 14:29, 16 April 2013 (diff | hist) . . (0) . . Export (extension point)
- 14:28, 16 April 2013 (diff | hist) . . (-1) . . m Export (extension point) (Cosmetic)
- 14:28, 16 April 2013 (diff | hist) . . (0) . . N File:Diagram-export-dialog.png (top)
- 14:27, 16 April 2013 (diff | hist) . . (+49) . . Export (extension point) (+Identifier)
- 14:26, 16 April 2013 (diff | hist) . . (-14) . . Diagram view part (extension point)
- 14:26, 16 April 2013 (diff | hist) . . (+2,092) . . N Export (extension point) (Imported from developer's guide)
- 13:51, 16 April 2013 (diff | hist) . . (-10) . . BioUML web edition
- 13:51, 16 April 2013 (diff | hist) . . (0) . . m BioUML web edition (Mazilla -> Mozilla)
- 13:02, 12 April 2013 (diff | hist) . . (-10) . . BioStore (Stub template removed)
- 13:00, 12 April 2013 (diff | hist) . . (+36) . . N Tagir Valeev (Created page with "Tagir Valeev, PhD. BioUML developer.")
- 12:58, 12 April 2013 (diff | hist) . . (+411) . . N BioUML wiki Bot (Bot description)
- 14:30, 5 April 2013 (diff | hist) . . (0) . . File:DAE-models-Metabolic-Control-Analysis-mca.png (Lan@dote.ru uploaded a new version of "File:DAE-models-Metabolic-Control-Analysis-mca.png": Reverted to version as of 06:15, 5 April 2013)
- 12:54, 5 April 2013 (diff | hist) . . (+52) . . N Category:Extension points (Created page with "Extension points supported by BioUML are listed here")
- 16:27, 4 April 2013 (diff | hist) . . (+160) . . N Category:Autogenerated pages (Created page with "This category includes all pages automatically maintained by WikiBot. It's not recommended to edit these pages as these edits might be removed upon next update.")
- 16:13, 4 April 2013 (diff | hist) . . (0) . . m Category:Analyses (Removed protection from "Category:Analyses")
- 16:07, 4 April 2013 (diff | hist) . . (+42) . . BioUML wiki
- 16:07, 4 April 2013 (diff | hist) . . (0) . . m Category:Analyses (Protected "Category:Analyses": Counter-productive edit warring: This is auto-generated category ([edit=sysop] (indefinite) [move=sysop] (indefinite)))
- 15:56, 4 April 2013 (diff | hist) . . (+9) . . BioUML wiki
- 15:56, 4 April 2013 (diff | hist) . . (-8) . . BioUML wiki
- 15:55, 4 April 2013 (diff | hist) . . (+9) . . BioUML wiki
- 15:55, 4 April 2013 (diff | hist) . . (-3) . . BioUML wiki
- 13:21, 28 March 2013 (diff | hist) . . (+1) . . BioUML workbench
- 13:21, 28 March 2013 (diff | hist) . . (+47) . . BioUML workbench
- 13:20, 28 March 2013 (diff | hist) . . (+2) . . Template:BioUML current version
- 13:20, 28 March 2013 (diff | hist) . . (+3) . . N Template:BioUML current version (Created page with "9.4")
- 13:20, 28 March 2013 (diff | hist) . . (+48) . . BioUML web edition
- 13:19, 28 March 2013 (diff | hist) . . (+248) . . BioUML web edition
- 13:18, 28 March 2013 (diff | hist) . . (+106) . . BioUML workbench
- 13:17, 28 March 2013 (diff | hist) . . (0) . . N File:BioUML web edition screenshot.png (top)
- 13:17, 28 March 2013 (diff | hist) . . (+150) . . N BioUML web edition (Created page with "{{Stub}} BioUML web edition Free BioUML web edition is available at http://ie.biouml.org/bioumlweb.")
- 13:13, 28 March 2013 (diff | hist) . . (+10) . . BioUML
- 13:13, 28 March 2013 (diff | hist) . . (+1,162) . . N BioUML (Created page with "BioUML is an open source integrated Java platform for building virtual cell and virtual physiological human. It spans a comprehensive range of capabilities, including access t...")
- 13:11, 28 March 2013 (diff | hist) . . (0) . . N File:BioStore logo.png (top)
- 13:10, 28 March 2013 (diff | hist) . . (+198) . . N BioStore (Created page with "{{Stub}} BioStore logo BioStore is the central authentication and authorization server for all BioUML-related products. It's located on ...")
- 13:08, 28 March 2013 (diff | hist) . . (+15) . . BioUML wiki
- 13:06, 28 March 2013 (diff | hist) . . (+63) . . BioUML wiki
- 13:05, 28 March 2013 (diff | hist) . . (0) . . BioUML workbench
- 13:05, 28 March 2013 (diff | hist) . . (0) . . BioUML workbench
- 13:01, 28 March 2013 (diff | hist) . . (0) . . BioUML workbench
- 13:01, 28 March 2013 (diff | hist) . . (+23) . . BioUML workbench
- 12:59, 28 March 2013 (diff | hist) . . (+237) . . N Template:Stub (Created page with "{| style="color:#000000; width: 70%; border:solid 1px #A8A8A8; padding:0.5em; margin:0.5em 0; background-color:#EEEEEE;font-size:95%; vertical-align:middle; text-align: center...")
- 12:54, 28 March 2013 (diff | hist) . . (0) . . N File:BioUML workbench screenshot.png (top)
- 12:54, 28 March 2013 (diff | hist) . . (+102) . . N BioUML workbench (Created page with "{{Stub}} File:BioUML workbench screenshot.png == See also == * BioUML workbench installation")
- 12:51, 28 March 2013 (diff | hist) . . (+62) . . N Category:Analyses (Created page with "This category lists analyses which can be performed in BioUML.")
- 12:50, 28 March 2013 (diff | hist) . . (0) . . BioUML wiki
- 12:48, 28 March 2013 (diff | hist) . . (+27) . . BioUML wiki
- 12:47, 28 March 2013 (diff | hist) . . (-1) . . BioUML wiki
- 12:44, 28 March 2013 (diff | hist) . . (-9) . . BioUML server installation
- 12:44, 28 March 2013 (diff | hist) . . (+17) . . BioUML server installation
- 12:43, 28 March 2013 (diff | hist) . . (+335) . . N BioUML workbench installation (Created page with "This page describes how to install BioUML workbench == Prerequisites == * Java 1.6 or 1.7 (either Oracle or OpenJDK) == Download == To download BioUML workbench you have to ...")
- 12:40, 28 March 2013 (diff | hist) . . (+28) . . Galaxy installation
- 12:39, 28 March 2013 (diff | hist) . . (+113) . . N Databases installation (Created page with "Please select the topic of interest: * Gene ontology installation Category:Installation")
- 12:38, 28 March 2013 (diff | hist) . . (+82) . . BioUML installation (top)
- 12:37, 28 March 2013 (diff | hist) . . (-8,182) . . BioUML installation (Replaced content with "Please select the topic of interest: * BioUML workbench installation * BioUML server installation")
- 12:37, 28 March 2013 (diff | hist) . . (+27) . . R installation
- 12:36, 28 March 2013 (diff | hist) . . (+601) . . N R installation (Created page with "This page describes how to install R for BioUML. You need to perform the following steps: * R itself: yum install R or apt-get install r-recommended * Rserve: apt-get inst...")
- 12:36, 28 March 2013 (diff | hist) . . (-515) . . BioUML server installation
- 12:35, 28 March 2013 (diff | hist) . . (+2) . . BioUML server installation
- 12:34, 28 March 2013 (diff | hist) . . (+8,315) . . N BioUML server installation (Created page with "This page describes how to install BioUML server provided that you have a CVS access to BioUML sources. == Paths == The following paths will be referred within this document:...")
- 12:33, 28 March 2013 (diff | hist) . . (+27) . . Galaxy installation
- 12:33, 28 March 2013 (diff | hist) . . (-4) . . Category:Installation (top)
- 12:32, 28 March 2013 (diff | hist) . . (+24) . . Category:Installation
- 12:31, 28 March 2013 (diff | hist) . . (+14) . . N Category:Installation (Created page with "{{Categories}}")
- 12:30, 28 March 2013 (diff | hist) . . (+719) . . N GO installation (Created page with "This page describes how to install Gene onthology database and integrate it with BioUML server or BioUML workbench * Download database dump from GO ftp: <code><nowiki>ftp://f...")
- 12:27, 28 March 2013 (diff | hist) . . (+1,415) . . N Galaxy installation (Created page with "This page describes how to integrate Galaxy with installed BioUML server. * Download Galaxy distribution and unpack it somewhere. It usually contains galaxy_dist directory. L...")
- 12:25, 28 March 2013 (diff | hist) . . (+8,288) . . N BioUML installation (Created page with "This page describes how to install BioUML server provided that you have a CVS access to BioUML sources. == Paths == The following paths will be referred within this document:...")
- 12:01, 28 March 2013 (diff | hist) . . (+26) . . BioUML wiki
- 11:55, 28 March 2013 (diff | hist) . . (+22) . . BioUML wiki
- 11:49, 28 March 2013 (diff | hist) . . (0) . . File:ISB logo.png (Lan@dote.ru uploaded a new version of "File:ISB logo.png": Transparent background) (top)
- 11:45, 28 March 2013 (diff | hist) . . (+33) . . N File:ISB logo.png (Institute of Systems Biology Logo)
- 16:10, 26 March 2013 (diff | hist) . . (+9) . . BioUML wiki
- 16:09, 26 March 2013 (diff | hist) . . (-2) . . BioUML wiki
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