Difference between revisions of "Biouml.plugins.bindingregions (plugin)"
From BioUML platform
(Automatic synchronization with BioUML) |
m (Protected "Biouml.plugins.bindingregions (plugin)": Autogenerated page ([edit=sysop] (indefinite))) |
Revision as of 13:41, 17 June 2013
- ID
- biouml.plugins.bindingregions
- Name
- Binding-regions related analyses
- Provider
- Institute of Systems Biology
- Version
- 0.9.4
Analysis methods
Analysis methods defined in this plugin:
Analysis of Cis-Regulatory Modules
Analysis of five site models
Binding regions summary
ChIP-Seq characteristics distribution
Cis-module identification
Count olig frequencies
Create matrix by mixture of normal components
Create matrix by mixture of normal components (ChIP-seq)
Distinct TF classes
Gathering genome statistics
IPS ROC-curves
IPS prediction
IPS-scores in SNPs
Merge binding regions for cell-lines
Mixture of normal components
Non-merged ChIP-Seq tracks summary
SNP regions in genome
SNPs in binding regions