Difference between revisions of "Ru.biosoft.analysis (plugin)"
From BioUML platform
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:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
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=== Extension points === | === Extension points === | ||
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*[[File:Data-Affymetrix-normalization-icon.png]] [[Affymetrix normalization (analysis)|Affymetrix normalization]] | *[[File:Data-Affymetrix-normalization-icon.png]] [[Affymetrix normalization (analysis)|Affymetrix normalization]] | ||
*[[File:Data-Agilent-normalization-icon.png]] [[Agilent normalization (analysis)|Agilent normalization]] | *[[File:Data-Agilent-normalization-icon.png]] [[Agilent normalization (analysis)|Agilent normalization]] | ||
| − | *[[File: | + | *[[File:Data-Annotate-diagram-icon.png]] [[Annotate diagram (analysis)|Annotate diagram]] |
*[[File:Data-Annotate-table-icon.png]] [[Annotate table (analysis)|Annotate table]] | *[[File:Data-Annotate-table-icon.png]] [[Annotate table (analysis)|Annotate table]] | ||
*[[File:Data-CRC-Analysis-icon.png]] [[CRC Analysis]] | *[[File:Data-CRC-Analysis-icon.png]] [[CRC Analysis]] | ||
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*[[File:Data-Create-folder-icon.png]] [[Create folder (analysis)|Create folder]] | *[[File:Data-Create-folder-icon.png]] [[Create folder (analysis)|Create folder]] | ||
*[[File:Default-analysis-icon.png]] [[Diagram graph compare analysis]] | *[[File:Default-analysis-icon.png]] [[Diagram graph compare analysis]] | ||
| − | *[[File: | + | *[[File:Statistics-Differential-expression-with-DESeq-icon.png]] [[Differential expression with DESeq (analysis)|Differential expression with DESeq]] |
*[[File:Admin-Export-element-icon.png]] [[Export element (analysis)|Export element]] | *[[File:Admin-Export-element-icon.png]] [[Export element (analysis)|Export element]] | ||
*[[File:Molecular-networks-Extend-network-icon.png]] [[Extend network (analysis)|Extend network]] | *[[File:Molecular-networks-Extend-network-icon.png]] [[Extend network (analysis)|Extend network]] | ||
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*[[File:ReferenceType-ProbeTableType-icon.png]] [[Probes (reference type)|Probes]] | *[[File:ReferenceType-ProbeTableType-icon.png]] [[Probes (reference type)|Probes]] | ||
*[[File:ReferenceType-ProteinTableType-icon.png]] [[Proteins (reference type)|Proteins]] | *[[File:ReferenceType-ProteinTableType-icon.png]] [[Proteins (reference type)|Proteins]] | ||
| + | *[[File:ReferenceType-SubstanceType-icon.png]] [[Substances (reference type)|Substances]] | ||
*[[File:ReferenceType-TranscriptTableType-icon.png]] [[Transcripts (reference type)|Transcripts]] | *[[File:ReferenceType-TranscriptTableType-icon.png]] [[Transcripts (reference type)|Transcripts]] | ||
Revision as of 19:03, 13 February 2017
- ID
- ru.biosoft.analysis
- Name
- Common methods of data analysis plug-in
- Provider
- Institute of Systems Biology
- Version
- 0.9.10
Contents |
Extension points
Extension points defined in this plugin:
Analysis methods
Analysis methods defined in this plugin:
Affymetrix normalization
Agilent normalization
Annotate diagram
Annotate table
CRC Analysis
Check quotas
- Clean up SQL database
Cluster analysis by K-means
Convert table
- Copy data element
- Copy folder
Correlation Analysis
Create folder
- Diagram graph compare analysis
Differential expression with DESeq
Export element
Extend network
- Filter duplicate rows
Filter table
Fold-Change calculation
- Group table rows
Hypergeometric analysis
Illumina normalization
Join diagrams
Join several tables
Join table
Meta analysis
Polynomial Regression analysis
- Remove unobservable molecules
Select table columns
- Share molecules
Up and Down Identification
Venn diagrams
Host objects
JavaScript host objects defined in this plugin:
Reference types
Reference types defined in this plugin:
