Difference between revisions of "Visualize results (analysis)"
From BioUML platform
(Plugin name added) |
(Automatic synchronization with BioUML) |
||
| (4 intermediate revisions by one user not shown) | |||
| Line 3: | Line 3: | ||
;Provider | ;Provider | ||
:[[geneXplain GmbH]] | :[[geneXplain GmbH]] | ||
| + | ;Class | ||
| + | :{{Class|biouml.plugins.keynodes.KeyNodeVisualization}} | ||
;Plugin | ;Plugin | ||
| − | :biouml.plugins.keynodes (Master regulator node analysis plugin) | + | :[[Biouml.plugins.keynodes (plugin)|biouml.plugins.keynodes (Master regulator node analysis plugin)]] |
=== Visualize results of drug target search analysis === | === Visualize results of drug target search analysis === | ||
| Line 15: | Line 17: | ||
* '''Analysis result''' — a result of [[Regulator search (analysis)|Regulator search]] or [[Effector search (analysis)|Effector search]] analyses | * '''Analysis result''' — a result of [[Regulator search (analysis)|Regulator search]] or [[Effector search (analysis)|Effector search]] analyses | ||
| − | * '''Rank column''' — a name of a | + | * '''Rank column''' — a name of a column in analysis result table, that will be used as rank, i.e. table will be sorted in descending order by this column |
* '''Number of top ranking molecules''' — signalling networks corresponding to selected top lines will be displayed as diagram | * '''Number of top ranking molecules''' — signalling networks corresponding to selected top lines will be displayed as diagram | ||
* '''Output name''' — result diagram path | * '''Output name''' — result diagram path | ||
Latest revision as of 19:01, 13 February 2017
- Analysis title
Visualize results
- Provider
- geneXplain GmbH
- Class
KeyNodeVisualization- Plugin
- biouml.plugins.keynodes (Master regulator node analysis plugin)
[edit] Visualize results of drug target search analysis
[edit] Goal:
Display signalling networks as diagram.
[edit] Parameters:
- Analysis result — a result of Regulator search or Effector search analyses
- Rank column — a name of a column in analysis result table, that will be used as rank, i.e. table will be sorted in descending order by this column
- Number of top ranking molecules — signalling networks corresponding to selected top lines will be displayed as diagram
- Output name — result diagram path
