Difference between revisions of "Stem loop predictor (analysis)"

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==== Description ====
 
==== Description ====
Predictds microRNA stem loops
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Predictds microRNA stem loops.
  
 
==== Parameters: ====
 
==== Parameters: ====
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[[Category:Analyses]]
 
[[Category:Analyses]]
[[Category:BSA (analyses group)]]
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[[Category:MicroRNA (analyses group)]]
 
[[Category:ISB analyses]]
 
[[Category:ISB analyses]]
 
[[Category:Autogenerated pages]]
 
[[Category:Autogenerated pages]]

Latest revision as of 18:15, 9 December 2020

Analysis title
Default-analysis-icon.png Stem loop predictor
Provider
Institute of Systems Biology
Class
StemLoopPredictor
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

[edit] Description

Predictds microRNA stem loops.

[edit] Parameters:

  • inputTrack – inputTrack
  • Properties for track import – Properties for track import
    • Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
    • Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
  • match – match
  • mismatch – mismatch
  • gap – gap
  • scoreThreshold – scoreThreshold
  • outputTable – outputTable
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