View source for Stem loop predictor (analysis)

;Analysis title
:[[File:Default-analysis-icon.png]] Stem loop predictor
;Provider
:[[Institute of Systems Biology]]
;Class
:{{Class|ru.biosoft.bsa.analysis.StemLoopPredictor}}
;Plugin
:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]

==== Description ====
Predictds microRNA stem loops

==== Parameters: ====

* '''inputTrack''' – inputTrack
* '''Properties for track import''' – Properties for track import
** '''Sequences source''' – Select database to get sequences from or <nowiki>'</nowiki>Custom<nowiki>'</nowiki> to specify sequences location manually
** '''Sequence collection''' – Specify path to folder containing sequences if <nowiki>'</nowiki>Custom<nowiki>'</nowiki> sequences source is selected
* '''match''' – match
* '''mismatch''' – mismatch
* '''gap''' – gap
* '''scoreThreshold''' – scoreThreshold
* '''outputTable''' – outputTable

[[Category:Analyses]]
[[Category:BSA (analyses group)]]
[[Category:ISB analyses]]
[[Category:Autogenerated pages]]