Difference between revisions of "Identification of cis-regulatory modules with given pattern of TF-classes (analysis)"
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* '''Pattern of cis-regulatory module''' – Select TF-classes | * '''Pattern of cis-regulatory module''' – Select TF-classes | ||
* '''Path to table with genes''' – Path to table with genes | * '''Path to table with genes''' – Path to table with genes | ||
| − | * '''Path to output folder''' – Output folder will be created under this location | + | * '''Path to output folder''' – Output folder will be created under this location when it doesn<nowiki>'</nowiki>t exist |
[[Category:Analyses]] | [[Category:Analyses]] | ||
Latest revision as of 12:19, 25 August 2015
- Analysis title
Identification of cis-regulatory modules with given pattern of TF-classes
- Provider
- Institute of Systems Biology
- Class
CisModuleWithGivenPatternIdentification- Plugin
- biouml.plugins.bindingregions (Binding-regions related analyses)
[edit] Description
Identification of cis-regulatory modules with given pattern of TF-classes
[edit] Parameters:
- Input track – Select input track (it has to contain the merged binding regions; it can be the result of 'Merge binding regions for cell-lines' analysis)
- Maximal number of missing TF-classes – Maximal number of TF-classes that can be absent in cis-regulatory modules
- Pattern of cis-regulatory module – Select TF-classes
- Path to table with genes – Path to table with genes
- Path to output folder – Output folder will be created under this location when it doesn't exist
