Difference between revisions of "Biouml.plugins.ensembl (plugin)"

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(Automatic synchronization with BioUML)
(Automatic synchronization with BioUML)
 
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:[[Institute of Systems Biology]]
 
:[[Institute of Systems Biology]]
 
;Version
 
;Version
:0.9.9
+
:0.9.10
  
 
=== Analysis methods ===
 
=== Analysis methods ===
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*[[File:BSA-Annotate-track-with-genes-icon.png]] [[Annotate track with genes (analysis)|Annotate track with genes]]
 
*[[File:BSA-Annotate-track-with-genes-icon.png]] [[Annotate track with genes (analysis)|Annotate track with genes]]
 
*[[File:Data-Convert-table-via-homology-icon.png]] [[Convert table via homology (analysis)|Convert table via homology]]
 
*[[File:Data-Convert-table-via-homology-icon.png]] [[Convert table via homology (analysis)|Convert table via homology]]
*[[File:Default-analysis-icon.png]] [[Count reads in transcripts (analysis)|Count reads in transcripts]]
 
 
*[[File:Default-analysis-icon.png]] [[Gene overlap statistics (analysis)|Gene overlap statistics]]
 
*[[File:Default-analysis-icon.png]] [[Gene overlap statistics (analysis)|Gene overlap statistics]]
 +
*[[File:BSA-Get-transcripts-track-icon.png]] [[Get transcripts track (analysis)|Get transcripts track]]
 +
*[[File:Default-analysis-icon.png]] [[Import ensembl homology (analysis)|Import ensembl homology]]
 
*[[File:BSA-Mutation-effect-icon.png]] [[Mutation effect (analysis)|Mutation effect]]
 
*[[File:BSA-Mutation-effect-icon.png]] [[Mutation effect (analysis)|Mutation effect]]
*[[File:Default-analysis-icon.png]] [[Prepare GTF annotation (analysis)|Prepare GTF annotation]]
+
*[[File:BSA-Prepare-GTF-annotation-icon.png]] [[Prepare GTF annotation (analysis)|Prepare GTF annotation]]
 +
*[[File:BSA-Read-counter-icon.png]] [[Read counter (analysis)|Read counter]]
 +
*[[File:BSA-SNP-matching-icon.png]] [[SNP matching (analysis)|SNP matching]]
 
*[[File:Default-analysis-icon.png]] [[Site distribution (analysis)|Site distribution]]
 
*[[File:Default-analysis-icon.png]] [[Site distribution (analysis)|Site distribution]]
 
*[[File:BSA-Track-to-gene-set-icon.png]] [[Track to gene set (analysis)|Track to gene set]]
 
*[[File:BSA-Track-to-gene-set-icon.png]] [[Track to gene set (analysis)|Track to gene set]]
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*[[File:ReferenceType-GenBankGeneTableType-icon.png]] [[Genes - GenBank|Genes: GenBank]]
 
*[[File:ReferenceType-GenBankGeneTableType-icon.png]] [[Genes - GenBank|Genes: GenBank]]
 
*[[File:ReferenceType-GeneSymbolTableType-icon.png]] [[Genes - Gene symbol|Genes: Gene symbol]]
 
*[[File:ReferenceType-GeneSymbolTableType-icon.png]] [[Genes - Gene symbol|Genes: Gene symbol]]
*[[File:ReferenceType-RefSeqGeneTableType-icon.png]] [[Genes - RefSeq|Genes: RefSeq]]
 
 
*[[File:ReferenceType-UniGeneTableType-icon.png]] [[Genes - Unigene|Genes: Unigene]]
 
*[[File:ReferenceType-UniGeneTableType-icon.png]] [[Genes - Unigene|Genes: Unigene]]
 
*[[File:ReferenceType-AffymetrixProbeTableType-icon.png]] [[Probes - Affymetrix|Probes: Affymetrix]]
 
*[[File:ReferenceType-AffymetrixProbeTableType-icon.png]] [[Probes - Affymetrix|Probes: Affymetrix]]

Latest revision as of 16:35, 12 March 2019

ID
biouml.plugins.ensembl
Name
Support for Ensembl database and Ensembl-specific analyses
Provider
Institute of Systems Biology
Version
0.9.10

[edit] Analysis methods

Analysis methods defined in this plugin:

[edit] Host objects

JavaScript host objects defined in this plugin:

[edit] Reference types

Reference types defined in this plugin:

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