Create profile from matrix library (analysis)

From BioUML platform
Jump to: navigation, search
Analysis title
BSA-Create-profile-from-matrix-library-icon.png Create profile from matrix library
Provider
geneXplain GmbH
Class
CreateProfileFromMatrices
Plugin
com.genexplain.analyses (geneXplain analyses)

Description

Create profile based on existing matrix library

Parameters:

  • Input matrix library – Library to create the profile on
  • Core-cutoff – Cutoff for matrix core
  • Template for cutoffs – Precalculate cutoffs using the template
  • Cutoff – Matrix cutoff
  • Nucleotide distribution template – Template used in cut-off templates calculation
  • Nucleotide distribution – Custom nucleotide distribution used in cut-off templates calculation
    • A frequency – A frequency
    • C frequency – C frequency
    • G frequency – G frequency
    • T frequency – T frequency
  • Output profile – Profile to create
Personal tools
Namespaces

Variants
Actions
BioUML platform
Community
Modelling
Analysis & Workflows
Collaborative research
Development
Virtual biology
Wiki
Toolbox