Difference between revisions of "Site search summary (analysis)"

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;Analysis title
 
;Analysis title
:[[File:Site-search-summary-analysis-icon.png]] Site search summary
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:[[File:TF-binding-site-search-Site-search-summary-icon.png]] Site search summary
 
;Provider
 
;Provider
 
:[[Institute of Systems Biology]]
 
:[[Institute of Systems Biology]]
 +
;Class
 +
:{{Class|ru.biosoft.bsa.analysis.SiteSearchSummary}}
 
;Plugin
 
;Plugin
 
:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]
 
:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]
  
 
==== Description ====
 
==== Description ====
Generate summary on site search result
+
Generate summary on site search result.
  
 
==== Parameters: ====
 
==== Parameters: ====
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[[Category:Analyses]]
 
[[Category:Analyses]]
[[Category:BSA (analyses group)]]
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[[Category:TF binding site search (analyses group)]]
 
[[Category:ISB analyses]]
 
[[Category:ISB analyses]]
 
[[Category:Autogenerated pages]]
 
[[Category:Autogenerated pages]]

Latest revision as of 18:15, 9 December 2020

Analysis title
TF-binding-site-search-Site-search-summary-icon.png Site search summary
Provider
Institute of Systems Biology
Class
SiteSearchSummary
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

[edit] Description

Generate summary on site search result.

[edit] Parameters:

  • Yes track – Site search result for genes expressed in experiment
  • No track – Site search result for background genes
  • Overrepresented matrices in summary – Remove underrepresented matrices from the output (not applicable if no-set is not specified)
  • Output name – Output name
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