Difference between revisions of "MicroRNA aligner (analysis)"

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;Analysis title
 
;Analysis title
:[[File:MicroRNA-aligner-analysis-icon.png]] MicroRNA aligner
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:[[File:BSA-MicroRNA-aligner-icon.png]] MicroRNA aligner
 
;Provider
 
;Provider
 
:[[Institute of Systems Biology]]
 
:[[Institute of Systems Biology]]

Revision as of 12:40, 16 May 2013

Analysis title
File:BSA-MicroRNA-aligner-icon.png MicroRNA aligner
Provider
Institute of Systems Biology
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

Description

Aligns NGS reads to microRNA

Parameters:

  • csfasta – csfasta
  • qualities – qualities
  • miRNASequences – miRNASequences
  • adapter – adapter
  • mismatchPenalty – mismatchPenalty
  • gapPenalty – gapPenalty
  • alignmentScoreThreshold – alignmentScoreThreshold
  • threadCount – threadCount
  • alignment – alignment
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