Difference between revisions of "MicroRNA aligner (analysis)"

From BioUML platform
Jump to: navigation, search
(Analysis icon added)
(Space after icon)
Line 1: Line 1:
 
;Analysis title
 
;Analysis title
:[[File:BSA-MicroRNA-aligner-icon.png]]MicroRNA aligner
+
:[[File:BSA-MicroRNA-aligner-icon.png]] MicroRNA aligner
 
;Provider
 
;Provider
 
:[[Institute of Systems Biology]]
 
:[[Institute of Systems Biology]]

Revision as of 17:02, 23 April 2013

Analysis title
File:BSA-MicroRNA-aligner-icon.png MicroRNA aligner
Provider
Institute of Systems Biology

Description

Aligns NGS reads to microRNA

Parameters:

  • csfasta – csfasta
  • qualities – qualities
  • miRNASequences – miRNASequences
  • adapter – adapter
  • mismatchPenalty – mismatchPenalty
  • gapPenalty – gapPenalty
  • alignmentScoreThreshold – alignmentScoreThreshold
  • threadCount – threadCount
  • alignment – alignment
Personal tools
Namespaces

Variants
Actions
BioUML platform
Community
Modelling
Analysis & Workflows
Collaborative research
Development
Virtual biology
Wiki
Toolbox