Gathering genome statistics (analysis)

From BioUML platform
Revision as of 13:38, 17 June 2013 by BioUML wiki Bot (Talk | contribs)

Jump to: navigation, search
Analysis title
Default-analysis-icon.png Gathering genome statistics
Provider
Institute of Systems Biology
Class
GatheringGenomeStatistics
Plugin
biouml.plugins.bindingregions (Binding-regions related analyses)

Description

Preliminary identification of the auxiliary information about genome (creation of tracks: '_chromosomeGaps', '_chromosomeLengths', '_genes', 'summaryOfGenes')

Parameters:

  • Sequences collection – Select a source of nucleotide sequences
    • Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
    • Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
  • Path to output folder – Output folder will be created under this location
Personal tools
Namespaces

Variants
Actions
BioUML platform
Community
Modelling
Analysis & Workflows
Collaborative research
Development
Virtual biology
Wiki
Toolbox