Difference between revisions of "Filter one track by another (analysis)"
From BioUML platform
(Automatic synchronization with BioUML) |
(Automatic synchronization with BioUML) |
||
| Line 1: | Line 1: | ||
;Analysis title | ;Analysis title | ||
| − | :[[File: | + | :[[File:Operations-with-genomic-tracks-Filter-one-track-by-another-icon.png]] Filter one track by another |
;Provider | ;Provider | ||
:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
| Line 18: | Line 18: | ||
* '''Fields to compare''' – Consider sites equal when these fields values match aside from sites position and strand | * '''Fields to compare''' – Consider sites equal when these fields values match aside from sites position and strand | ||
* '''Fields to copy from filter track''' (expert) – Fields to copy from filter track | * '''Fields to copy from filter track''' (expert) – Fields to copy from filter track | ||
| + | * '''Ignore empty values''' (expert) – Ignore empty values during aggregator work | ||
* '''Aggregator for numbers''' (expert) – Function to be used for numerical properties when sites intervals intersects | * '''Aggregator for numbers''' (expert) – Function to be used for numerical properties when sites intervals intersects | ||
* '''Filtering mode''' – Specify how to perform the filtering | * '''Filtering mode''' – Specify how to perform the filtering | ||
| Line 23: | Line 24: | ||
[[Category:Analyses]] | [[Category:Analyses]] | ||
| − | [[Category: | + | [[Category:Operations with genomic tracks (analyses group)]] |
[[Category:ISB analyses]] | [[Category:ISB analyses]] | ||
[[Category:Autogenerated pages]] | [[Category:Autogenerated pages]] | ||
Latest revision as of 18:15, 9 December 2020
- Analysis title
Filter one track by another
- Provider
- Institute of Systems Biology
- Class
FilterTrackAnalysis- Plugin
- ru.biosoft.bsa (Bio-sequences analyses plugin)
[edit] Description
This analysis filters out those sites which are present or absent in another track.
[edit] Parameters:
- Input track – Track which you want to filter
- Filter track – Track to use as a filter
- Max distance – Maximal difference between site starts and ends to consider sites equal
- Fields to compare – Consider sites equal when these fields values match aside from sites position and strand
- Fields to copy from filter track (expert) – Fields to copy from filter track
- Ignore empty values (expert) – Ignore empty values during aggregator work
- Aggregator for numbers (expert) – Function to be used for numerical properties when sites intervals intersects
- Filtering mode – Specify how to perform the filtering
- Output track – Specify the location where to store results
