Difference between revisions of "Create profile from gene table (analysis)"

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;Analysis title
 
;Analysis title
:[[File:BSA-Create-profile-from-gene-table-icon.png]] Create profile from gene table
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:[[File:TF-binding-site-search-Create-profile-from-gene-table-icon.png]] Create profile from gene table
 
;Provider
 
;Provider
 
:[[Institute of Systems Biology]]
 
:[[Institute of Systems Biology]]
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;Class
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:{{Class|ru.biosoft.bsa.analysis.createsitemodel.FilterProfileByGeneSet}}
 
;Plugin
 
;Plugin
:ru.biosoft.bsa (Bio-sequences analyses plugin)
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:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]
  
 
==== Description ====
 
==== Description ====
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[[Category:Analyses]]
 
[[Category:Analyses]]
[[Category:BSA (analyses group)]]
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[[Category:TF binding site search (analyses group)]]
 
[[Category:ISB analyses]]
 
[[Category:ISB analyses]]
 
[[Category:Autogenerated pages]]
 
[[Category:Autogenerated pages]]

Latest revision as of 18:15, 9 December 2020

Analysis title
TF-binding-site-search-Create-profile-from-gene-table-icon.png Create profile from gene table
Provider
Institute of Systems Biology
Class
FilterProfileByGeneSet
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

[edit] Description

Creates new profile which contains only site models linked to factors from given gene set.

[edit] Parameters:

  • Gene set – Table with genes to filter profile by
  • Species – Select species
  • Reference profile – Site models from this profile which map to genes from gene set will be copied to the result
  • Output path – Where to store the result
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