Difference between revisions of "Create IPS model (analysis)"

From BioUML platform
Jump to: navigation, search
(Mistaken file names update reverted)
(Automatic synchronization with BioUML)
 
(One intermediate revision by one user not shown)
Line 1: Line 1:
 
;Analysis title
 
;Analysis title
:[[File:BSA-Create-IPS-model-icon.png]] Create IPS model
+
:[[File:Motif-discovery-Create-IPS-model-icon.png]] Create IPS model
 
;Provider
 
;Provider
 
:[[Institute of Systems Biology]]
 
:[[Institute of Systems Biology]]
 +
;Class
 +
:{{Class|ru.biosoft.bsa.analysis.createsitemodel.CreateIPSModel}}
 
;Plugin
 
;Plugin
 
:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]
 
:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]
  
 
==== Description ====
 
==== Description ====
Creates IPS site model
+
Creates IPS site model.
  
 
==== Parameters: ====
 
==== Parameters: ====
Line 19: Line 21:
  
 
[[Category:Analyses]]
 
[[Category:Analyses]]
[[Category:BSA (analyses group)]]
+
[[Category:Motif discovery (analyses group)]]
 
[[Category:ISB analyses]]
 
[[Category:ISB analyses]]
 
[[Category:Autogenerated pages]]
 
[[Category:Autogenerated pages]]

Latest revision as of 18:15, 9 December 2020

Analysis title
Motif-discovery-Create-IPS-model-icon.png Create IPS model
Provider
Institute of Systems Biology
Class
CreateIPSModel
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

[edit] Description

Creates IPS site model.

[edit] Parameters:

  • Frequency matrices – Frequency matrices
  • Critical IPS score – Critical IPS score
  • Window size – Window size
  • Minimal distance – Minimal distance between sites
  • Output collection – Collection where site model will be saved
  • Model name – The name of model name to create
Personal tools
Namespaces

Variants
Actions
BioUML platform
Community
Modelling
Analysis & Workflows
Collaborative research
Development
Virtual biology
Wiki
Toolbox