Difference between revisions of "Create IPS model (analysis)"

From BioUML platform
Jump to: navigation, search
(Automatic synchronization with BioUML)
 
(Automatic synchronization with BioUML)
 
(12 intermediate revisions by one user not shown)
Line 1: Line 1:
Creates IPS site model
+
;Analysis title
 +
:[[File:Motif-discovery-Create-IPS-model-icon.png]] Create IPS model
 +
;Provider
 +
:[[Institute of Systems Biology]]
 +
;Class
 +
:{{Class|ru.biosoft.bsa.analysis.createsitemodel.CreateIPSModel}}
 +
;Plugin
 +
:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]
 +
 
 +
==== Description ====
 +
Creates IPS site model.
  
 
==== Parameters: ====
 
==== Parameters: ====
  
* '''PN_FREQUENCY_MATRICES''' – PD_FREQUENCY_MATRICES
+
* '''Frequency matrices''' – Frequency matrices
 
* '''Critical IPS score''' – Critical IPS score
 
* '''Critical IPS score''' – Critical IPS score
 
* '''Window size''' – Window size
 
* '''Window size''' – Window size
Line 11: Line 21:
  
 
[[Category:Analyses]]
 
[[Category:Analyses]]
[[Category:BSA (analyses group)]]
+
[[Category:Motif discovery (analyses group)]]
 +
[[Category:ISB analyses]]
 +
[[Category:Autogenerated pages]]

Latest revision as of 18:15, 9 December 2020

Analysis title
Motif-discovery-Create-IPS-model-icon.png Create IPS model
Provider
Institute of Systems Biology
Class
CreateIPSModel
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

[edit] Description

Creates IPS site model.

[edit] Parameters:

  • Frequency matrices – Frequency matrices
  • Critical IPS score – Critical IPS score
  • Window size – Window size
  • Minimal distance – Minimal distance between sites
  • Output collection – Collection where site model will be saved
  • Model name – The name of model name to create
Personal tools
Namespaces

Variants
Actions
BioUML platform
Community
Modelling
Analysis & Workflows
Collaborative research
Development
Virtual biology
Wiki
Toolbox