Difference between revisions of "Cluster track (analysis)"
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* '''Input track''' – Input track | * '''Input track''' – Input track | ||
| + | * '''Genome''' – Reference genome | ||
| + | ** '''Sequences source''' – Select database to get sequences from or <nowiki>'</nowiki>Custom<nowiki>'</nowiki> to specify sequences location manually | ||
| + | ** '''Sequence collection''' – Specify path to folder containing sequences if <nowiki>'</nowiki>Custom<nowiki>'</nowiki> sequences source is selected | ||
* '''Max distance''' – Maximum allowed distance between adjacent sites in cluster | * '''Max distance''' – Maximum allowed distance between adjacent sites in cluster | ||
* '''Cluster size''' – Minimal size of cluster | * '''Cluster size''' – Minimal size of cluster | ||
Revision as of 16:16, 11 December 2014
- Analysis title
Cluster track
- Provider
- Institute of Systems Biology
- Class
ClusterTrack- Plugin
- ru.biosoft.bsa (Bio-sequences analyses plugin)
Description
Cluster sites in track
Parameters:
- Input track – Input track
- Genome – Reference genome
- Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
- Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
- Max distance – Maximum allowed distance between adjacent sites in cluster
- Cluster size – Minimal size of cluster
- Cluster track – Resulting track with cluster sites
