Track to gene set (analysis)
From BioUML platform
Revision as of 18:15, 9 December 2020 by BioUML wiki Bot (Talk | contribs)
- Analysis title
Track to gene set
- Provider
- Institute of Systems Biology
- Class
TrackToGeneSet- Plugin
- biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)
Description
Convert track to gene set (get all genes which lie near the sites from the track).
Parameters:
- Input tracks – Track(s) to be converted to genes
- Species – Taxonomical species
- 5' region size – Include 5' region (promoter) of given size in bp
- 3' region size – Include 3' region of given size in bp
- Types of resulting column – Types of resulting column
- allGenes – allGenes
- Output name – Output name
