Hadoop
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List of Hadoop applications for NGS
Hadoop MapReduce-based approaches have become increasingly popular due to their scalability in processing large sequencing data sets[1].
| Tool, Ref | Description | URL |
|---|---|---|
| SeqPig [1] | A library and a collection of tools to manipulate, analyze and query sequencing data sets in a scalable and simple manner.
SeqPig scripts use the Hadoop-based distributed scripting engine Apache Pig, which automatically parallelizes and distributes data processing tasks. |
http://sourceforge.net/projects/seqpig/
http://seqpig.sourceforge.net/ (manual) |
References
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