IPS ROC-curves (analysis)
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Revision as of 13:38, 17 June 2013 by BioUML wiki Bot (Talk | contribs)
- Analysis title
IPS ROC-curves
- Provider
- Institute of Systems Biology
- Class
IPSROCCurve- Plugin
- biouml.plugins.bindingregions (Binding-regions related analyses)
Description
ROC-curves: influence of common score threshold on IPSSiteModel (or logIPSSiteModel) in merged binding regions
Parameters:
- Input track – Select input ChIP-seq track (must be the result of 'Merge binding regions for cell-lines' analysis)
- Matrix – Path to positional weight matrix
- TF class – TF class in Wingender classification (like '2.1.1.1.4')
- Log transformation – Check to consider log-models
- Output table – Table with charts will be created in this location
