Process track with sites (analysis)
From BioUML platform
Revision as of 12:32, 16 May 2013 by BioUML wiki Bot (Talk | contribs)
- Analysis title
- File:Process-track-with-sites-analysis-icon.png Process track with sites
- Provider
- Institute of Systems Biology
- Plugin
- ru.biosoft.bsa (Bio-sequences analyses plugin)
Description
This analysis allows you to enlarge/shrink sites on the track, merge overlapping sites or remove too short sites
Parameters:
- Source track – Track you want to process
- Sequences – Sequences to use
- Enlarge sites at start – Use positive numbers to enlarge and negative to shrink
- Enlarge sites at end – Use positive numbers to enlarge and negative to shrink
- Merge overlapping – Merges overlapping sites into a single site. Site annotations will be lost!
- Remove small sites – If checked, sites smaller then 'Minimal site size' will be removed, otherwise they will be expanded to 'Minimal site size'
- Minimal site size – Sites shorter than specified size will be removed from output
- Output track – Path for processed track
