MicroRNA aligner (analysis)

From BioUML platform
Jump to: navigation, search
Analysis title
File:BSA-MicroRNA-aligner-icon.png MicroRNA aligner
Provider
Institute of Systems Biology
Class
MicroRNAAligner
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

Description

Aligns NGS reads to microRNA

Parameters:

  • csfasta – csfasta
  • qualities – qualities
  • miRNASequences – miRNASequences
  • adapter – adapter
  • mismatchPenalty – mismatchPenalty
  • gapPenalty – gapPenalty
  • alignmentScoreThreshold – alignmentScoreThreshold
  • threadCount – threadCount
  • alignment – alignment
Personal tools
Namespaces

Variants
Actions
BioUML platform
Community
Modelling
Analysis & Workflows
Collaborative research
Development
Virtual biology
Wiki
Toolbox