Linear Shifted Model (analysis)

Analysis title

Linear Shifted Model

Provider

Institute of Systems Biology

Class

LinearShiftedModelBuilding

Plugin

biouml.plugins.genemodels (Gene expression models building)

Description

Linear Shifted Model of gene expression regulation

Parameters:

• Number of experiments – Number of experiments
• Experiments – Experiments
• Regulator list – Table with regulators ID
• Target list – Table with regulators ID
• P-value threshold – Only results with a P-value below this threshold will appear in the output
• Output table – Output table
• Maximum shift – Maximum shift between regulator and target
• Shift definition – Shift definition
• Include degradation – Include protein degradation in gene regulation model
• Target smothing type – Smoothing type for target gene profile
  • class – class
  • nameInParent – nameInParent
  • notificationEnabled – notificationEnabled
  • parameter – parameter
  • propagationEnabled – propagationEnabled
  • type – type
  • typeAsString – typeAsString
• Regulator smothing type – Smoothing type for regulator gene profile
  • class – class
  • nameInParent – nameInParent
  • notificationEnabled – notificationEnabled
  • parameter – parameter
  • propagationEnabled – propagationEnabled
  • type – type
  • typeAsString – typeAsString