Difference between revisions of "Track to gene set (analysis)"
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* '''3<nowiki>'</nowiki> region size''' – Include 3<nowiki>'</nowiki> region of given size in bp | * '''3<nowiki>'</nowiki> region size''' – Include 3<nowiki>'</nowiki> region of given size in bp | ||
* '''Types of resulting column''' – Types of resulting column | * '''Types of resulting column''' – Types of resulting column | ||
| + | * '''allGenes''' – allGenes | ||
* '''Output name''' – Output name | * '''Output name''' – Output name | ||
Revision as of 16:32, 12 March 2019
- Analysis title
Track to gene set
- Provider
- Institute of Systems Biology
- Class
TrackToGeneSet- Plugin
- biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)
Description
Convert track to gene set (get all genes which lie near the sites from the track)
Parameters:
- Input tracks – Track(s) to be converted to genes
- Species – Taxonomical species
- 5' region size – Include 5' region (promoter) of given size in bp
- 3' region size – Include 3' region of given size in bp
- Types of resulting column – Types of resulting column
- allGenes – allGenes
- Output name – Output name
