Difference between revisions of "Biouml.plugins.ensembl (plugin)"
From BioUML platform
(Automatic synchronization with BioUML) |
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:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
;Version | ;Version | ||
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=== Analysis methods === | === Analysis methods === | ||
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*[[File:BSA-Annotate-track-with-genes-icon.png]] [[Annotate track with genes (analysis)|Annotate track with genes]] | *[[File:BSA-Annotate-track-with-genes-icon.png]] [[Annotate track with genes (analysis)|Annotate track with genes]] | ||
*[[File:Data-Convert-table-via-homology-icon.png]] [[Convert table via homology (analysis)|Convert table via homology]] | *[[File:Data-Convert-table-via-homology-icon.png]] [[Convert table via homology (analysis)|Convert table via homology]] | ||
| − | |||
*[[File:Default-analysis-icon.png]] [[Gene overlap statistics (analysis)|Gene overlap statistics]] | *[[File:Default-analysis-icon.png]] [[Gene overlap statistics (analysis)|Gene overlap statistics]] | ||
| + | *[[File:Default-analysis-icon.png]] [[Get transcripts track (analysis)|Get transcripts track]] | ||
| + | *[[File:Default-analysis-icon.png]] [[Import ensembl homology (analysis)|Import ensembl homology]] | ||
*[[File:BSA-Mutation-effect-icon.png]] [[Mutation effect (analysis)|Mutation effect]] | *[[File:BSA-Mutation-effect-icon.png]] [[Mutation effect (analysis)|Mutation effect]] | ||
| − | *[[File: | + | *[[File:BSA-Prepare-GTF-annotation-icon.png]] [[Prepare GTF annotation (analysis)|Prepare GTF annotation]] |
*[[File:Default-analysis-icon.png]] [[Site distribution (analysis)|Site distribution]] | *[[File:Default-analysis-icon.png]] [[Site distribution (analysis)|Site distribution]] | ||
*[[File:BSA-Track-to-gene-set-icon.png]] [[Track to gene set (analysis)|Track to gene set]] | *[[File:BSA-Track-to-gene-set-icon.png]] [[Track to gene set (analysis)|Track to gene set]] | ||
Revision as of 19:02, 13 February 2017
- ID
- biouml.plugins.ensembl
- Name
- Support for Ensembl database and Ensembl-specific analyses
- Provider
- Institute of Systems Biology
- Version
- 0.9.10
Analysis methods
Analysis methods defined in this plugin:
Annotate track with genes
Convert table via homology
Gene overlap statistics
- Get transcripts track
- Import ensembl homology
Mutation effect
Prepare GTF annotation
- Site distribution
Track to gene set
Host objects
JavaScript host objects defined in this plugin:
Reference types
Reference types defined in this plugin:
