Difference between revisions of "Nonlinear Model (analysis)"
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* '''Output table''' – Output table | * '''Output table''' – Output table | ||
* '''Regulator smothing type''' – Smoothing type for regulator gene profile | * '''Regulator smothing type''' – Smoothing type for regulator gene profile | ||
− | ** ''' | + | ** '''Error''' – Spline error |
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* '''Optimization method''' – Optimization method | * '''Optimization method''' – Optimization method | ||
− | ** ''' | + | ** '''Number of iterations''' – Number of iterations |
− | ** ''' | + | ** '''Survival size''' – Survival size |
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* '''Best regulator quantity''' – Number of best regulators for each target in output | * '''Best regulator quantity''' – Number of best regulators for each target in output | ||
Revision as of 12:20, 25 August 2015
- Analysis title
- Nonlinear Model
- Provider
- Institute of Systems Biology
- Class
NonLinearModelBuilding
- Plugin
- biouml.plugins.genemodels (Gene expression models building)
Description
Nonlinear model of gene regulation
Parameters:
- Number of experiments – Number of experiments
- Experiments – Experiments
- Regulator list – Table with regulators ID
- Target list – Table with regulators ID
- P-value threshold – Only results with a P-value below this threshold will appear in the output
- Output table – Output table
- Regulator smothing type – Smoothing type for regulator gene profile
- Error – Spline error
- Optimization method – Optimization method
- Number of iterations – Number of iterations
- Survival size – Survival size
- Best regulator quantity – Number of best regulators for each target in output