Difference between revisions of "Analysis of Cis-Regulatory Modules (analysis)"
From BioUML platform
(Default analysis icon as separate file) |
(Automatic synchronization with BioUML) |
||
| Line 4: | Line 4: | ||
:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
;Class | ;Class | ||
| − | :{{Class| | + | :{{Class|biouml.plugins.bindingregions.cisregmodule.CisRegModule}} |
;Plugin | ;Plugin | ||
| − | :[[ | + | :[[Biouml.plugins.bindingregions (plugin)|biouml.plugins.bindingregions (Binding-regions related analyses)]] |
==== Parameters: ==== | ==== Parameters: ==== | ||
Revision as of 13:37, 17 June 2013
- Analysis title
Analysis of Cis-Regulatory Modules
- Provider
- Institute of Systems Biology
- Class
CisRegModule- Plugin
- biouml.plugins.bindingregions (Binding-regions related analyses)
Parameters:
- MODE – MODE defines the concrete session of given analysis. The detailed description of MODE see in panel 'Application Log'
- Exp parameters – Exp parameters
- Sequence path – Sequence path
- ChIP-Seq Regions path – ChIP-Seq Regions path
- Sequences path – It is nessecary for determination of Genome Build
- Minimal number of overlaps – Minimally admissible number of overlapped ChIP-Seq regions
- Specie – Specie
- Table path – Path where to save resulting table (includes proper table name
