Difference between revisions of "Annotate track with genes (analysis)"
From BioUML platform
(Mistaken file names update reverted) |
(Class name added) |
||
Line 3: | Line 3: | ||
;Provider | ;Provider | ||
:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
+ | ;Class | ||
+ | :{{Class|biouml.plugins.ensembl.analysis.AnnotateTrackWithGenes}} | ||
;Plugin | ;Plugin | ||
:[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]] | :[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]] |
Revision as of 11:13, 31 May 2013
- Analysis title
- Annotate track with genes
- Provider
- Institute of Systems Biology
- Class
AnnotateTrackWithGenes
- Plugin
- biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)
Description
Add properties to each track site describing genes where this site falls
Parameters:
- Input track – Track to annotate
- Species – Taxonomical species
- 5' region size – Include 5' region (promoter) of given size in bp
- 3' region size – Include 3' region of given size in bp
- Output track – Where to store an output