Difference between revisions of "Linear Shifted Model (analysis)"
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* '''Include degradation''' – Include protein degradation in gene regulation model | * '''Include degradation''' – Include protein degradation in gene regulation model | ||
* '''Target smothing type''' – Smoothing type for target gene profile | * '''Target smothing type''' – Smoothing type for target gene profile | ||
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* '''Regulator smothing type''' – Smoothing type for regulator gene profile | * '''Regulator smothing type''' – Smoothing type for regulator gene profile | ||
| − | ** ''' | + | ** '''Error''' – Spline error |
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[[Category:Analyses]] | [[Category:Analyses]] | ||
Revision as of 12:20, 25 August 2015
- Analysis title
Linear Shifted Model
- Provider
- Institute of Systems Biology
- Class
LinearShiftedModelBuilding- Plugin
- biouml.plugins.genemodels (Gene expression models building)
Description
Linear Shifted Model of gene expression regulation
Parameters:
- Number of experiments – Number of experiments
- Experiments – Experiments
- Regulator list – Table with regulators ID
- Target list – Table with regulators ID
- P-value threshold – Only results with a P-value below this threshold will appear in the output
- Output table – Output table
- Maximum shift – Maximum shift between regulator and target
- Shift definition – Shift definition
- Include degradation – Include protein degradation in gene regulation model
- Target smothing type – Smoothing type for target gene profile
- Error – Spline error
- Regulator smothing type – Smoothing type for regulator gene profile
- Error – Spline error
