Difference between revisions of "Track to gene set (analysis)"
From BioUML platform
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:[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]] | :[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]] | ||
Revision as of 11:14, 31 May 2013
- Analysis title
Track to gene set
- Provider
- Institute of Systems Biology
- Class
TrackToGeneSet- Plugin
- biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)
Description
Convert track to gene set (get all genes which lie near the sites from the track)
Parameters:
- Input tracks – Track(s) to be converted to genes
- Species – Taxonomical species
- 5' region size – Include 5' region (promoter) of given size in bp
- 3' region size – Include 3' region of given size in bp
- Types of resulting column – Types of resulting column
- Output name – Output name
