Difference between revisions of "Track to gene set (analysis)"
From BioUML platform
(Automatic synchronization with BioUML) |
(Automatic synchronization with BioUML) |
||
| Line 1: | Line 1: | ||
;Analysis title | ;Analysis title | ||
| − | :[[File: | + | :[[File:Track-to-gene-set-analysis-icon.png]] Track to gene set |
;Provider | ;Provider | ||
:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
Revision as of 12:32, 16 May 2013
- Analysis title
- File:Track-to-gene-set-analysis-icon.png Track to gene set
- Provider
- Institute of Systems Biology
- Plugin
- biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)
Description
Convert track to gene set (get all genes which lie near the sites from the track)
Parameters:
- Input tracks – Track(s) to be converted to genes
- Species – Taxonomical species
- 5' region size – Include 5' region (promoter) of given size in bp
- 3' region size – Include 3' region of given size in bp
- Types of resulting column – Types of resulting column
- Output name – Output name
