Difference between revisions of "Prepare Search by regulation (analysis)"

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m (Protected "Prepare Search by regulation (analysis)": Autogenerated page (‎[edit=sysop] (indefinite)))
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==== Description ====
 
==== Description ====
Prepare tables for Search by regulation analysis
+
Prepare tables for Search by regulation analysis.
  
 
==== Parameters: ====
 
==== Parameters: ====
  
 
* '''allPeaksPath''' – allPeaksPath
 
* '''allPeaksPath''' – allPeaksPath
* '''Properties for track import''' – Properties for track import
+
* '''ensembl''' – ensembl
** '''Sequences source''' – Select database to get sequences from or <nowiki>'</nowiki>Custom<nowiki>'</nowiki> to specify sequences location manually
+
** '''Sequence collection''' – Specify path to folder containing sequences if <nowiki>'</nowiki>Custom<nowiki>'</nowiki> sequences source is selected
+
 
* '''geneMaxDistance''' – geneMaxDistance
 
* '''geneMaxDistance''' – geneMaxDistance
* '''outputTrack''' – outputTrack
 
 
* '''outputTable''' – outputTable
 
* '''outputTable''' – outputTable
  
 
[[Category:Analyses]]
 
[[Category:Analyses]]
[[Category:GTRD (analyses group)]]
+
[[Category:GTRD build (analyses group)]]
 
[[Category:ISB analyses]]
 
[[Category:ISB analyses]]
 
[[Category:Autogenerated pages]]
 
[[Category:Autogenerated pages]]

Latest revision as of 18:14, 9 December 2020

Analysis title
Default-analysis-icon.png Prepare Search by regulation
Provider
Institute of Systems Biology
Class
PrepareSearchByRegulation
Plugin
biouml.plugins.gtrd (GTRD)

[edit] Description

Prepare tables for Search by regulation analysis.

[edit] Parameters:

  • allPeaksPath – allPeaksPath
  • ensembl – ensembl
  • geneMaxDistance – geneMaxDistance
  • outputTable – outputTable
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