Difference between revisions of "Distinct TF classes (analysis)"

Latest revision as of 12:19, 25 August 2015

Distinct TF classes: Identification of their binding regions as cisModules2 of their repeated tracks

Sequences collection – Select a source of nucleotide sequences
- Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
- Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
Folder containing ChIP-seq tracks – Folder containing ChIP-seq tracks
Species – Select a taxonomical species
Minimal number of overlaps – Minimal number of overlaps
Path to output folder – Output folder will be created under this location when it doesn't exist

@@ Line 1: / Line 1: @@
 ;Analysis title
-:[[File:Binding-regions-Distinct-TF-classes-icon.png]] Distinct TF classes
+:[[File:Default-analysis-icon.png]] Distinct TF classes
 ;Provider
 :[[Institute of Systems Biology]]
 ;Class
-:{{Class|ru.biosoft.bsa.analysis.bindingRegions.DistinctTFClasses}}
+:{{Class|biouml.plugins.bindingregions.analysis.DistinctTFClasses}}
 ;Plugin
-:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]
+:[[Biouml.plugins.bindingregions (plugin)|biouml.plugins.bindingregions (Binding-regions related analyses)]]
 ==== Description ====
@@ Line 19: / Line 19: @@
 * '''Species''' – Select a taxonomical species
 * '''Minimal number of overlaps''' – Minimal number of overlaps
-* '''Path to output folder''' – Output folder will be created under this location
+* '''Path to output folder''' – Output folder will be created under this location when it doesn<nowiki>'</nowiki>t exist
 [[Category:Analyses]]