Difference between revisions of "Mutation effect (analysis)"

Latest revision as of 18:15, 9 December 2020

Analysis title: Mutation effect
Provider: Institute of Systems Biology
Class: Analysis
Plugin: biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)

Determine effect of mutation on protein.

Input track – Track of mutations to process
Properties for track import – Properties for track import
- Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
- Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
Output track – Output track

@@ Line 1: / Line 1: @@
 ;Analysis title
-:[[File:BSA-Mutation-effect-icon.png]] Mutation effect
+:[[File:Mutations-Mutation-effect-icon.png]] Mutation effect
 ;Provider
 :[[Institute of Systems Biology]]
+;Class
+:{{Class|biouml.plugins.ensembl.analysis.mutationeffect.Analysis}}
 ;Plugin
-:[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl using EnsJ)]]
+:[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]]
 ==== Description ====
-Determine effect of mutation on protein
+Determine effect of mutation on protein.
 ==== Parameters: ====
 * '''Input track''' – Track of mutations to process
+* '''Properties for track import''' – Properties for track import
+** '''Sequences source''' – Select database to get sequences from or <nowiki>'</nowiki>Custom<nowiki>'</nowiki> to specify sequences location manually
+** '''Sequence collection''' – Specify path to folder containing sequences if <nowiki>'</nowiki>Custom<nowiki>'</nowiki> sequences source is selected
 * '''Output track''' – Output track
 [[Category:Analyses]]
-[[Category:BSA (analyses group)]]
+[[Category:Mutations (analyses group)]]
 [[Category:ISB analyses]]
 [[Category:Autogenerated pages]]