Difference between revisions of "Create database from diagram (analysis)"
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==== Description ==== | ==== Description ==== | ||
| − | Create database from diagram | + | Create database from diagram. |
==== Parameters: ==== | ==== Parameters: ==== | ||
Latest revision as of 18:14, 9 December 2020
- Analysis title
Create database from diagram
- Provider
- Institute of Systems Biology
- Class
DiagramToDatabase- Plugin
- biouml.plugins.metabolics (Metabolics Analysis)
[edit] Description
Create database from diagram.
[edit] Parameters:
- Diagram – Path to the diagram you want to convert to the database
- ID extractor – An algorithm which matches diagram IDs (diagram-specific)
- Species – Species
- Use threshold for stop-molecules – Uncheck to specify stop-molecules list explicitly
- Stop-molecule threshold – If molecule participates in more reactions than specified it will be marked as stop-molecule
- Stop molecules list – Path to the table containing stop-molecules IDs
- Stop-reaction threshold – If reaction has more reactants or products than the specified number, it will be marked as ignored
- Database name – The name of the newly-created database
