Difference between revisions of "Process track with sites (analysis)"

Revision as of 16:27, 4 April 2013

This analysis allows you to enlarge/shrink sites on the track, merge overlapping sites or remove too short sites

Parameters:

• Source track – Track you want to process
• Sequences – Sequences to use
• Enlarge sites at start – Use positive numbers to enlarge and negative to shrink
• Enlarge sites at end – Use positive numbers to enlarge and negative to shrink
• Merge overlapping – Merges overlapping sites into a single site. Site annotations will be lost!
• Remove small sites – If checked, sites smaller then 'Minimal site size' will be removed, otherwise they will be expanded to 'Minimal site size'
• Minimal site size – Sites shorter than specified size will be removed from output
• Output track – Path for processed track